Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RPS3AP17-201ENST00000472594 777 ntBASIC3□□□□□ -1.93
NKX2-1P43699 RPS20P22-201ENST00000473700 357 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC010631.1-201ENST00000474150 156 ntBASIC3□□□□□ -1.93
NKX2-1P43699 RPL32P34-201ENST00000486380 400 ntBASIC3□□□□□ -1.93
NKX2-1P43699 RPL9P6-201ENST00000492764 598 ntBASIC3□□□□□ -1.93
NKX2-1P43699 RNU2-10P-201ENST00000516375 211 ntBASIC3□□□□□ -1.93
NKX2-1P43699 SNORA31.9-201ENST00000516429 84 ntBASIC3□□□□□ -1.93
NKX2-1P43699 RNA5SP337-201ENST00000517007 109 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC090572.1-201ENST00000519251 160 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3□□□□□ -1.93
NKX2-1P43699 AC022690.1-201ENST00000526681 550 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC011602.1-201ENST00000546484 331 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3□□□□□ -1.93
NKX2-1P43699 AC136619.2-201ENST00000563361 631 ntBASIC3□□□□□ -1.93
NKX2-1P43699 TPRKBP2-201ENST00000565969 475 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3□□□□□ -1.93
NKX2-1P43699 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3□□□□□ -1.93
NKX2-1P43699 MIR3939-201ENST00000582614 106 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC093227.2-201ENST00000589357 285 ntBASIC3□□□□□ -1.93
NKX2-1P43699 RNU4-89P-201ENST00000607443 133 ntBASIC3□□□□□ -1.93
NKX2-1P43699 MLECP1-201ENST00000615893 709 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC026585.1-201ENST00000619582 524 ntBASIC3□□□□□ -1.93
NKX2-1P43699 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3□□□□□ -1.93
NKX2-1P43699 PLCE1P1-201ENST00000622094 305 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC138649.3-201ENST00000622154 254 ntBASIC3□□□□□ -1.93
NKX2-1P43699 OR5AK4P-201ENST00000635912 903 ntBASIC3□□□□□ -1.93
NKX2-1P43699 PSMD5-AS1-215ENST00000640622 205 ntBASIC3□□□□□ -1.93
NKX2-1P43699 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3□□□□□ -1.93
NKX2-1P43699 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3□□□□□ -1.93
NKX2-1P43699 TPTE2P4-201ENST00000258589 1605 ntBASIC3□□□□□ -1.93
NKX2-1P43699 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
NKX2-1P43699 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
NKX2-1P43699 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NKX2-1P43699 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.99□□□□□ -1.93
NKX2-1P43699 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
NKX2-1P43699 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 CR848007.1-201ENST00000442354 1699 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 OR1S2-201ENST00000302592 978 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 OR4G2P-201ENST00000328113 903 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 RNA5SP42-201ENST00000364278 115 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 RNU6-517P-201ENST00000384362 110 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 SNORA70C-201ENST00000384538 135 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 RNU4-6P-201ENST00000410804 122 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 RN7SKP140-201ENST00000411196 284 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AL451054.2-201ENST00000420896 202 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC104651.1-201ENST00000427559 735 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 MTCO2P11-201ENST00000431069 680 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 OR2B8P-201ENST00000432841 938 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 RPL36AP6-201ENST00000435770 321 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 ARPC3P1-201ENST00000437218 533 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC020550.1-201ENST00000447385 163 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 C1DP4-201ENST00000455429 424 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AC010401.1-201ENST00000463867 348 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AC084357.1-201ENST00000473404 255 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AL049874.1-201ENST00000489560 388 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 CEACAMP10-202ENST00000495431 496 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC010460.1-201ENST00000507087 466 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 RNU6-1282P-201ENST00000516735 96 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AC022695.1-201ENST00000522089 237 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC022616.3-201ENST00000523940 148 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC004024.1-201ENST00000549244 247 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 RPS3AP4-201ENST00000555161 764 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 HMGB1P14-201ENST00000557424 591 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AP001094.1-201ENST00000579805 193 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC098614.4-201ENST00000607601 462 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AC007684.1-201ENST00000609671 477 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AL136295.6-201ENST00000610486 658 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 AC110801.1-201ENST00000623590 212 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AC110994.2-201ENST00000635481 492 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AC068137.3-201ENST00000639191 341 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 AC073869.6-201ENST00000640656 341 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NKX2-1P43699 OR4G2P-202ENST00000641004 1759 ntBASIC2.99□□□□□ -1.93
NKX2-1P43699 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NKX2-1P43699 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms