Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RPPH1-2P-201ENST00000516688 293 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.36□□□□□ -2.03
RFC3P40938 RPL7P20-201ENST00000520308 745 ntBASIC2.36□□□□□ -2.03
RFC3P40938 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.36□□□□□ -2.03
RFC3P40938 AP001646.1-201ENST00000527936 915 ntBASIC2.36□□□□□ -2.03
RFC3P40938 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RFC3P40938 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.36□□□□□ -2.03
RFC3P40938 DNAJC19P3-201ENST00000594491 331 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.36□□□□□ -2.03
RFC3P40938 AC068620.3-201ENST00000602749 560 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AL158211.4-201ENST00000606988 584 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AL161734.1-201ENST00000609720 557 ntBASIC2.36□□□□□ -2.03
RFC3P40938 AC009237.15-201ENST00000610252 501 ntBASIC2.36□□□□□ -2.03
RFC3P40938 UCA1.1-201ENST00000620952 75 ntBASIC2.36□□□□□ -2.03
RFC3P40938 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.36□□□□□ -2.03
RFC3P40938 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.36□□□□□ -2.03
RFC3P40938 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.36□□□□□ -2.03
RFC3P40938 AC010149.2-201ENST00000637608 315 ntBASIC2.36□□□□□ -2.03
RFC3P40938 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
RFC3P40938 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
RFC3P40938 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RFC3P40938 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RFC3P40938 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.36□□□□□ -2.03
RFC3P40938 CR848007.1-201ENST00000442354 1699 ntBASIC2.35□□□□□ -2.03
RFC3P40938 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RFC3P40938 Y_RNA.234-201ENST00000364409 97 ntBASIC2.35□□□□□ -2.03
RFC3P40938 SNORD114-30-201ENST00000364448 72 ntBASIC2.35□□□□□ -2.03
RFC3P40938 RNU6-224P-201ENST00000384055 107 ntBASIC2.35□□□□□ -2.03
RFC3P40938 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RFC3P40938 AL445529.1-201ENST00000398713 389 ntBASIC2.35□□□□□ -2.03
RFC3P40938 RNU2-25P-201ENST00000411041 191 ntBASIC2.35□□□□□ -2.03
RFC3P40938 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.35□□□□□ -2.03
RFC3P40938 AC009963.1-201ENST00000417265 157 ntBASIC2.35□□□□□ -2.03
RFC3P40938 USP9YP20-201ENST00000419224 558 ntBASIC2.35□□□□□ -2.03
RFC3P40938 RPL32P28-201ENST00000443577 397 ntBASIC2.35□□□□□ -2.03
RFC3P40938 MTCYBP3-201ENST00000445588 1137 ntBASIC2.35□□□□□ -2.03
RFC3P40938 CACYBPP2-201ENST00000453625 678 ntBASIC2.35□□□□□ -2.03
RFC3P40938 AC092155.2-201ENST00000454675 477 ntBASIC2.35□□□□□ -2.03
RFC3P40938 RPL18AP17-201ENST00000455326 198 ntBASIC2.35□□□□□ -2.03
RFC3P40938 SNORD121B-201ENST00000458838 81 ntBASIC2.35□□□□□ -2.03
RFC3P40938 RPL31P41-201ENST00000477967 372 ntBASIC2.35□□□□□ -2.03
RFC3P40938 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.35□□□□□ -2.03
RFC3P40938 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
RFC3P40938 AP002748.2-201ENST00000528671 348 ntBASIC2.35□□□□□ -2.03
RFC3P40938 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RFC3P40938 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RFC3P40938 AC009163.5-201ENST00000575421 637 ntBASIC2.35□□□□□ -2.03
RFC3P40938 AC024060.1-201ENST00000607052 494 ntBASIC2.35□□□□□ -2.03
RFC3P40938 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.35□□□□□ -2.03
RFC3P40938 AL445264.1-201ENST00000621719 171 ntBASIC2.35□□□□□ -2.03
RFC3P40938 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RFC3P40938 AC103798.2-201ENST00000624292 632 ntBASIC2.35□□□□□ -2.03
RFC3P40938 AL159972.1-201ENST00000625150 448 ntBASIC2.35□□□□□ -2.03
RFC3P40938 AP003399.1-201ENST00000637534 361 ntBASIC2.35□□□□□ -2.03
RFC3P40938 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFC3P40938 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
RFC3P40938 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
RFC3P40938 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.35□□□□□ -2.03
RFC3P40938 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
RFC3P40938 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RFC3P40938 AC022336.2-201ENST00000568966 2538 ntBASIC2.34□□□□□ -2.03
RFC3P40938 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
RFC3P40938 RNU5E-8P-201ENST00000363502 116 ntBASIC2.34□□□□□ -2.03
RFC3P40938 RNU4-51P-201ENST00000364206 140 ntBASIC2.34□□□□□ -2.03
RFC3P40938 RNU6-359P-201ENST00000365466 108 ntBASIC2.34□□□□□ -2.03
RFC3P40938 MIR767-201ENST00000390228 109 ntBASIC2.34□□□□□ -2.03
RFC3P40938 ANAPC10P1-201ENST00000395991 556 ntBASIC2.34□□□□□ -2.03
RFC3P40938 AC092047.1-201ENST00000424997 240 ntBASIC2.34□□□□□ -2.03
RFC3P40938 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.34□□□□□ -2.03
RFC3P40938 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.34□□□□□ -2.03
RFC3P40938 BNIP3P2-201ENST00000441221 577 ntBASIC2.34□□□□□ -2.03
RFC3P40938 MRPL50P4-201ENST00000446432 475 ntBASIC2.34□□□□□ -2.03
RFC3P40938 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.34□□□□□ -2.03
RFC3P40938 MTND2P24-201ENST00000453434 806 ntBASIC2.34□□□□□ -2.03
RFC3P40938 RNU7-136P-201ENST00000458819 69 ntBASIC2.34□□□□□ -2.03
RFC3P40938 snoU13.8-201ENST00000458890 104 ntBASIC2.34□□□□□ -2.03
RFC3P40938 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.34□□□□□ -2.03
RFC3P40938 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.34□□□□□ -2.03
RFC3P40938 AC010486.1-201ENST00000511793 424 ntBASIC2.34□□□□□ -2.03
RFC3P40938 RN7SKP40-201ENST00000517211 242 ntBASIC2.34□□□□□ -2.03
RFC3P40938 CKS1BP7-201ENST00000522230 235 ntBASIC2.34□□□□□ -2.03
RFC3P40938 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RFC3P40938 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.03
RFC3P40938 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.34□□□□□ -2.03
RFC3P40938 AC007621.1-201ENST00000604544 437 ntBASIC2.34□□□□□ -2.03
RFC3P40938 AC103710.4-201ENST00000609301 899 ntBASIC2.34□□□□□ -2.03
RFC3P40938 RNU6-1192P-201ENST00000612197 107 ntBASIC2.34□□□□□ -2.03
RFC3P40938 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RFC3P40938 AC093838.1-201ENST00000613014 469 ntBASIC2.34□□□□□ -2.03
RFC3P40938 RNU6-489P-201ENST00000618289 107 ntBASIC2.34□□□□□ -2.03
RFC3P40938 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.34□□□□□ -2.03
RFC3P40938 AP003476.1-201ENST00000623984 516 ntBASIC2.34□□□□□ -2.03
RFC3P40938 OR1S1-201ENST00000624470 978 ntBASIC2.34□□□□□ -2.03
RFC3P40938 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.34□□□□□ -2.03
RFC3P40938 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
RFC3P40938 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.33□□□□□ -2.04
RFC3P40938 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RFC3P40938 AC004944.1-201ENST00000517807 3059 ntBASIC2.33□□□□□ -2.04
RFC3P40938 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.33□□□□□ -2.04
RFC3P40938 RNU6-343P-201ENST00000364709 104 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms