Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MIR4299-201ENST00000577899 72 ntBASIC1.29□□□□□ -2.2
SNCAP37840 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.29□□□□□ -2.2
SNCAP37840 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.29□□□□□ -2.2
SNCAP37840 AC010678.1-201ENST00000614118 713 ntBASIC1.29□□□□□ -2.2
SNCAP37840 SNORD114-1-201ENST00000362705 72 ntBASIC1.28□□□□□ -2.2
SNCAP37840 RNU6-1074P-201ENST00000383995 104 ntBASIC1.28□□□□□ -2.2
SNCAP37840 SNORA70B-201ENST00000384210 135 ntBASIC1.28□□□□□ -2.2
SNCAP37840 RNU6-452P-201ENST00000384406 107 ntBASIC1.28□□□□□ -2.2
SNCAP37840 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.28□□□□□ -2.2
SNCAP37840 RNU4-26P-201ENST00000410270 107 ntBASIC1.28□□□□□ -2.2
SNCAP37840 RN7SKP51-201ENST00000410781 304 ntBASIC1.28□□□□□ -2.2
SNCAP37840 AL445183.3-201ENST00000414168 502 ntBASIC1.28□□□□□ -2.2
SNCAP37840 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.28□□□□□ -2.2
SNCAP37840 AIMP1P2-201ENST00000425294 312 ntBASIC1.28□□□□□ -2.2
SNCAP37840 snoU13.28-201ENST00000459235 104 ntBASIC1.28□□□□□ -2.2
SNCAP37840 OR52A4P-202ENST00000481634 799 ntBASIC1.28□□□□□ -2.2
SNCAP37840 AC068781.1-201ENST00000488231 618 ntBASIC1.28□□□□□ -2.2
SNCAP37840 AC026801.1-201ENST00000497178 464 ntBASIC1.28□□□□□ -2.2
SNCAP37840 SNORA31.13-201ENST00000516624 135 ntBASIC1.28□□□□□ -2.2
SNCAP37840 SNORA48.10-201ENST00000516965 160 ntBASIC1.28□□□□□ -2.2
SNCAP37840 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SNCAP37840 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.28□□□□□ -2.2
SNCAP37840 FAM60BP-201ENST00000578364 658 ntBASIC1.28□□□□□ -2.2
SNCAP37840 AC011260.1-201ENST00000578420 472 ntBASIC1.28□□□□□ -2.2
SNCAP37840 MIR4285-201ENST00000581001 85 ntBASIC1.28□□□□□ -2.2
SNCAP37840 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
SNCAP37840 AL353748.2-201ENST00000622148 471 ntBASIC1.28□□□□□ -2.2
SNCAP37840 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SNCAP37840 MTND4P23-201ENST00000447723 1363 ntBASIC1.28□□□□□ -2.2
SNCAP37840 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.28□□□□□ -2.2
SNCAP37840 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SNCAP37840 AC006026.1-201ENST00000444025 1803 ntBASIC1.28□□□□□ -2.2
SNCAP37840 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
SNCAP37840 AC010329.5-201ENST00000623497 2174 ntBASIC1.28□□□□□ -2.2
SNCAP37840 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
SNCAP37840 TPTE2P4-201ENST00000258589 1605 ntBASIC1.27□□□□□ -2.21
SNCAP37840 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
SNCAP37840 MIR147B-201ENST00000390185 80 ntBASIC1.27□□□□□ -2.21
SNCAP37840 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
SNCAP37840 AC092745.2-202ENST00000411880 369 ntBASIC1.27□□□□□ -2.21
SNCAP37840 AC124916.1-201ENST00000444020 547 ntBASIC1.27□□□□□ -2.21
SNCAP37840 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.27□□□□□ -2.21
SNCAP37840 Y_RNA.675-201ENST00000516389 149 ntBASIC1.27□□□□□ -2.21
SNCAP37840 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.27□□□□□ -2.21
SNCAP37840 AP005639.2-201ENST00000527592 928 ntBASIC1.27□□□□□ -2.21
SNCAP37840 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.27□□□□□ -2.21
SNCAP37840 MIR4504-201ENST00000577413 92 ntBASIC1.27□□□□□ -2.21
SNCAP37840 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.27□□□□□ -2.21
SNCAP37840 AC098679.5-201ENST00000624394 571 ntBASIC1.27□□□□□ -2.21
SNCAP37840 AP003400.5-201ENST00000624827 617 ntBASIC1.27□□□□□ -2.21
SNCAP37840 AP003399.1-201ENST00000637534 361 ntBASIC1.27□□□□□ -2.21
SNCAP37840 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SNCAP37840 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SNCAP37840 RNU6-270P-201ENST00000364131 105 ntBASIC1.26□□□□□ -2.21
SNCAP37840 SNORA23-201ENST00000365128 182 ntBASIC1.26□□□□□ -2.21
SNCAP37840 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SNCAP37840 RNU1-148P-201ENST00000384472 162 ntBASIC1.26□□□□□ -2.21
SNCAP37840 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.26□□□□□ -2.21
SNCAP37840 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AC003685.2-201ENST00000422795 395 ntBASIC1.26□□□□□ -2.21
SNCAP37840 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.26□□□□□ -2.21
SNCAP37840 AL353729.1-201ENST00000425044 720 ntBASIC1.26□□□□□ -2.21
SNCAP37840 MTCO3P46-201ENST00000425787 232 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.26□□□□□ -2.21
SNCAP37840 AL357134.1-201ENST00000445848 426 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.26□□□□□ -2.21
SNCAP37840 AC069528.1-202ENST00000482888 637 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AC119751.5-201ENST00000514077 770 ntBASIC1.26□□□□□ -2.21
SNCAP37840 SNORA25.15-201ENST00000516487 89 ntBASIC1.26□□□□□ -2.21
SNCAP37840 RNU6-250P-201ENST00000516958 103 ntBASIC1.26□□□□□ -2.21
SNCAP37840 ARL2BPP2-201ENST00000550907 489 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.26□□□□□ -2.21
SNCAP37840 CYCSP2-201ENST00000558168 301 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.26□□□□□ -2.21
SNCAP37840 MIR5571-201ENST00000577998 113 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.26□□□□□ -2.21
SNCAP37840 NTAN1P1-201ENST00000603150 646 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AC021749.1-201ENST00000604322 607 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.26□□□□□ -2.21
SNCAP37840 MIR8081-201ENST00000611533 95 ntBASIC1.26□□□□□ -2.21
SNCAP37840 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.26□□□□□ -2.21
SNCAP37840 CDC27P3-201ENST00000635418 1910 ntBASIC1.26□□□□□ -2.21
SNCAP37840 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.26□□□□□ -2.21
SNCAP37840 MTND4P8-201ENST00000514997 1362 ntBASIC1.25□□□□□ -2.21
SNCAP37840 RNU1-62P-201ENST00000362599 164 ntBASIC1.25□□□□□ -2.21
SNCAP37840 RNU1-42P-201ENST00000364033 160 ntBASIC1.25□□□□□ -2.21
SNCAP37840 RNU6-31P-201ENST00000384388 108 ntBASIC1.25□□□□□ -2.21
SNCAP37840 RNU6-19P-201ENST00000384718 107 ntBASIC1.25□□□□□ -2.21
SNCAP37840 AL136372.1-201ENST00000403060 228 ntBASIC1.25□□□□□ -2.21
SNCAP37840 RNU6-712P-201ENST00000410558 100 ntBASIC1.25□□□□□ -2.21
SNCAP37840 OR9R1P-201ENST00000412200 877 ntBASIC1.25□□□□□ -2.21
SNCAP37840 USP9YP6-201ENST00000413550 854 ntBASIC1.25□□□□□ -2.21
SNCAP37840 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.25□□□□□ -2.21
SNCAP37840 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.25□□□□□ -2.21
SNCAP37840 GTF2IP20-201ENST00000431663 360 ntBASIC1.25□□□□□ -2.21
SNCAP37840 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.25□□□□□ -2.21
SNCAP37840 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.25□□□□□ -2.21
SNCAP37840 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.25□□□□□ -2.21
SNCAP37840 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.25□□□□□ -2.21
SNCAP37840 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms