Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LARP1BP2-201ENST00000486594 519 ntBASIC1.32□□□□□ -2.2
CKS2P33552 AC113420.1-201ENST00000507903 571 ntBASIC1.32□□□□□ -2.2
CKS2P33552 AC022447.1-201ENST00000515358 464 ntBASIC1.32□□□□□ -2.2
CKS2P33552 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.32□□□□□ -2.2
CKS2P33552 ZNF705CP-201ENST00000530515 889 ntBASIC1.32□□□□□ -2.2
CKS2P33552 AP001317.1-201ENST00000531194 960 ntBASIC1.32□□□□□ -2.2
CKS2P33552 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.32□□□□□ -2.2
CKS2P33552 MIR4299-201ENST00000577899 72 ntBASIC1.32□□□□□ -2.2
CKS2P33552 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.32□□□□□ -2.2
CKS2P33552 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.32□□□□□ -2.2
CKS2P33552 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.32□□□□□ -2.2
CKS2P33552 AC107905.1-201ENST00000616204 426 ntBASIC1.32□□□□□ -2.2
CKS2P33552 AC025048.6-202ENST00000627667 438 ntBASIC1.32□□□□□ -2.2
CKS2P33552 HSPA8P4-201ENST00000511877 1920 ntBASIC1.32□□□□□ -2.2
CKS2P33552 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
CKS2P33552 AL390862.1-201ENST00000635467 1469 ntBASIC1.31□□□□□ -2.2
CKS2P33552 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CKS2P33552 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 RNA5SP363-201ENST00000365072 115 ntBASIC1.31□□□□□ -2.2
CKS2P33552 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CKS2P33552 AL031679.1-201ENST00000400616 525 ntBASIC1.31□□□□□ -2.2
CKS2P33552 VN1R51P-201ENST00000411675 945 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AC023141.4-201ENST00000412031 328 ntBASIC1.31□□□□□ -2.2
CKS2P33552 SNORD56-201ENST00000413522 71 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.31□□□□□ -2.2
CKS2P33552 AC003685.2-201ENST00000422795 395 ntBASIC1.31□□□□□ -2.2
CKS2P33552 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.31□□□□□ -2.2
CKS2P33552 AC096920.1-201ENST00000423991 241 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CKS2P33552 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 AL353689.1-201ENST00000438895 199 ntBASIC1.31□□□□□ -2.2
CKS2P33552 RPL23AP16-201ENST00000441715 421 ntBASIC1.31□□□□□ -2.2
CKS2P33552 RPS3AP12-201ENST00000443616 753 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.31□□□□□ -2.2
CKS2P33552 MRPS17P3-201ENST00000465453 385 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AC092757.1-201ENST00000467293 467 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AC138853.1-201ENST00000503549 823 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.31□□□□□ -2.2
CKS2P33552 AC112518.2-201ENST00000508565 425 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 LARP7P3-201ENST00000579888 337 ntBASIC1.31□□□□□ -2.2
CKS2P33552 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.31□□□□□ -2.2
CKS2P33552 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.31□□□□□ -2.2
CKS2P33552 RPP40P2-201ENST00000603596 712 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.31□□□□□ -2.2
CKS2P33552 AL355297.2-201ENST00000604792 129 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AC012468.1-201ENST00000604888 430 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AL021997.1-201ENST00000605757 193 ntBASIC1.31□□□□□ -2.2
CKS2P33552 AC004908.2-201ENST00000609090 574 ntBASIC1.31□□□□□ -2.2
CKS2P33552 BX323046.1-201ENST00000610145 535 ntBASIC1.31□□□□□ -2.2
CKS2P33552 FRG1HP-204ENST00000617940 757 ntBASIC1.31□□□□□ -2.2
CKS2P33552 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.31□□□□□ -2.2
CKS2P33552 AL590396.2-201ENST00000636511 1041 ntBASIC1.31□□□□□ -2.2
CKS2P33552 MIR219B-201ENST00000637023 88 ntBASIC1.31□□□□□ -2.2
CKS2P33552 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.31□□□□□ -2.2
CKS2P33552 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.31□□□□□ -2.2
CKS2P33552 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
CKS2P33552 RNU6-234P-201ENST00000365229 104 ntBASIC1.3□□□□□ -2.2
CKS2P33552 U8.14-201ENST00000390843 143 ntBASIC1.3□□□□□ -2.2
CKS2P33552 SNORA48.2-201ENST00000390926 124 ntBASIC1.3□□□□□ -2.2
CKS2P33552 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CKS2P33552 AL024474.1-201ENST00000404655 591 ntBASIC1.3□□□□□ -2.2
CKS2P33552 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.3□□□□□ -2.2
CKS2P33552 RN7SKP32-201ENST00000410167 303 ntBASIC1.3□□□□□ -2.2
CKS2P33552 RNU2-43P-201ENST00000410306 190 ntBASIC1.3□□□□□ -2.2
CKS2P33552 RNU2-49P-201ENST00000410666 184 ntBASIC1.3□□□□□ -2.2
CKS2P33552 RNU4-53P-201ENST00000410828 140 ntBASIC1.3□□□□□ -2.2
CKS2P33552 RPL31P54-201ENST00000429803 370 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.3□□□□□ -2.2
CKS2P33552 AL049734.2-201ENST00000441066 616 ntBASIC1.3□□□□□ -2.2
CKS2P33552 RPL21P134-201ENST00000453468 483 ntBASIC1.3□□□□□ -2.2
CKS2P33552 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.3□□□□□ -2.2
CKS2P33552 AC107032.1-201ENST00000485945 480 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AC034222.1-201ENST00000494052 532 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AC026801.1-201ENST00000497178 464 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AC020699.1-201ENST00000505161 445 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.3□□□□□ -2.2
CKS2P33552 AC098591.2-201ENST00000510152 315 ntBASIC1.3□□□□□ -2.2
CKS2P33552 SNORA70.24-201ENST00000517233 118 ntBASIC1.3□□□□□ -2.2
CKS2P33552 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CKS2P33552 AP002748.2-201ENST00000528671 348 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AC118273.2-201ENST00000532092 465 ntBASIC1.3□□□□□ -2.2
CKS2P33552 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.3□□□□□ -2.2
CKS2P33552 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.3□□□□□ -2.2
CKS2P33552 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.3□□□□□ -2.2
CKS2P33552 MIR4529-201ENST00000578110 78 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.3□□□□□ -2.2
CKS2P33552 VN1R88P-201ENST00000596787 292 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AC068790.3-201ENST00000602988 553 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AC103710.1-201ENST00000610003 901 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AL589743.7-201ENST00000612637 233 ntBASIC1.3□□□□□ -2.2
CKS2P33552 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CKS2P33552 AC020658.4-201ENST00000613987 684 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AL162233.1-201ENST00000620014 944 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms