Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.86□□□□□ -1.79
CIITAP33076 MIR3690-201ENST00000580266 75 ntBASIC3.86□□□□□ -1.79
CIITAP33076 MIR3682-201ENST00000581338 84 ntBASIC3.86□□□□□ -1.79
CIITAP33076 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.86□□□□□ -1.79
CIITAP33076 DUXAP4-201ENST00000603046 613 ntBASIC3.86□□□□□ -1.79
CIITAP33076 BX664608.1-201ENST00000610519 487 ntBASIC3.86□□□□□ -1.79
CIITAP33076 AL355073.2-201ENST00000612106 557 ntBASIC3.86□□□□□ -1.79
CIITAP33076 AL592295.2-201ENST00000612578 206 ntBASIC3.86□□□□□ -1.79
CIITAP33076 AC007014.2-201ENST00000615581 479 ntBASIC3.86□□□□□ -1.79
CIITAP33076 AC012314.7-201ENST00000619693 93 ntBASIC3.86□□□□□ -1.79
CIITAP33076 AC091953.2-201ENST00000623979 160 ntBASIC3.86□□□□□ -1.79
CIITAP33076 MIR6863-201ENST00000636112 90 ntBASIC3.86□□□□□ -1.79
CIITAP33076 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CIITAP33076 GABPAP-201ENST00000419271 1356 ntBASIC3.86□□□□□ -1.79
CIITAP33076 ELF2P3-201ENST00000445099 1506 ntBASIC3.85□□□□□ -1.79
CIITAP33076 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CIITAP33076 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CIITAP33076 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CIITAP33076 RNU6-359P-201ENST00000365466 108 ntBASIC3.85□□□□□ -1.79
CIITAP33076 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.85□□□□□ -1.79
CIITAP33076 RNU6-780P-201ENST00000391030 104 ntBASIC3.85□□□□□ -1.79
CIITAP33076 BTF3P7-201ENST00000407097 488 ntBASIC3.85□□□□□ -1.79
CIITAP33076 Y_RNA.604-201ENST00000410574 102 ntBASIC3.85□□□□□ -1.79
CIITAP33076 OR1AA1P-201ENST00000419597 916 ntBASIC3.85□□□□□ -1.79
CIITAP33076 PIGFP2-201ENST00000421400 651 ntBASIC3.85□□□□□ -1.79
CIITAP33076 MTND4LP11-201ENST00000422184 280 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.85□□□□□ -1.79
CIITAP33076 RPL31P35-201ENST00000431058 377 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AC104850.1-201ENST00000435940 476 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.85□□□□□ -1.79
CIITAP33076 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.85□□□□□ -1.79
CIITAP33076 Z99127.3-201ENST00000448158 395 ntBASIC3.85□□□□□ -1.79
CIITAP33076 PSPHP1-201ENST00000450062 261 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AL359385.1-201ENST00000456509 365 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.85□□□□□ -1.79
CIITAP33076 RPS4XP10-201ENST00000465034 731 ntBASIC3.85□□□□□ -1.79
CIITAP33076 ST13P14-201ENST00000474095 734 ntBASIC3.85□□□□□ -1.79
CIITAP33076 MTAPP1-201ENST00000489154 819 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AC055855.1-201ENST00000489563 579 ntBASIC3.85□□□□□ -1.79
CIITAP33076 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.85□□□□□ -1.79
CIITAP33076 RNU6-1178P-201ENST00000516674 107 ntBASIC3.85□□□□□ -1.79
CIITAP33076 FAM92A1P1-201ENST00000528023 890 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.85□□□□□ -1.79
CIITAP33076 NCAPGP2-201ENST00000557911 754 ntBASIC3.85□□□□□ -1.79
CIITAP33076 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.85□□□□□ -1.79
CIITAP33076 AP000860.1-201ENST00000605250 559 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AP002360.4-201ENST00000606980 481 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.85□□□□□ -1.79
CIITAP33076 AC022306.2-201ENST00000617563 647 ntBASIC3.85□□□□□ -1.79
CIITAP33076 U7.8-201ENST00000619968 63 ntBASIC3.85□□□□□ -1.79
CIITAP33076 AL359880.1-201ENST00000621879 266 ntBASIC3.85□□□□□ -1.79
CIITAP33076 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CIITAP33076 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.85□□□□□ -1.79
CIITAP33076 AF127577.6-201ENST00000623352 2191 ntBASIC3.85□□□□□ -1.79
CIITAP33076 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CIITAP33076 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.79
CIITAP33076 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CIITAP33076 RNU5E-1-201ENST00000362477 120 ntBASIC3.84□□□□□ -1.79
CIITAP33076 Y_RNA.256-201ENST00000364594 104 ntBASIC3.84□□□□□ -1.79
CIITAP33076 RNA5SP267-201ENST00000364893 126 ntBASIC3.84□□□□□ -1.79
CIITAP33076 Y_RNA.296-201ENST00000364930 108 ntBASIC3.84□□□□□ -1.79
CIITAP33076 RNU6-282P-201ENST00000365357 103 ntBASIC3.84□□□□□ -1.79
CIITAP33076 Y_RNA.372-201ENST00000365599 102 ntBASIC3.84□□□□□ -1.79
CIITAP33076 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.84□□□□□ -1.79
CIITAP33076 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CIITAP33076 MIR34B-201ENST00000385076 84 ntBASIC3.84□□□□□ -1.79
CIITAP33076 MTCO3P40-201ENST00000392516 676 ntBASIC3.84□□□□□ -1.79
CIITAP33076 Z99755.1-201ENST00000414048 380 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.84□□□□□ -1.79
CIITAP33076 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CIITAP33076 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.84□□□□□ -1.79
CIITAP33076 MTCO2P11-201ENST00000431069 680 ntBASIC3.84□□□□□ -1.79
CIITAP33076 HMGB1P25-201ENST00000468402 607 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.84□□□□□ -1.79
CIITAP33076 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.84□□□□□ -1.79
CIITAP33076 COX7A2P2-201ENST00000505291 250 ntBASIC3.84□□□□□ -1.79
CIITAP33076 HMGB1P29-201ENST00000505659 499 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.84□□□□□ -1.79
CIITAP33076 ARL4AP2-201ENST00000507378 601 ntBASIC3.84□□□□□ -1.79
CIITAP33076 PCBP2P3-201ENST00000509726 843 ntBASIC3.84□□□□□ -1.79
CIITAP33076 IGKV2-23-201ENST00000518729 323 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.84□□□□□ -1.79
CIITAP33076 OR4P1P-201ENST00000530808 1136 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AK6P1-201ENST00000540219 478 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.84□□□□□ -1.79
CIITAP33076 AC005476.1-201ENST00000554427 397 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.84□□□□□ -1.79
CIITAP33076 AL356432.3-201ENST00000568952 465 ntBASIC3.84□□□□□ -1.79
CIITAP33076 NRBF2P1-201ENST00000587407 859 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.84□□□□□ -1.79
CIITAP33076 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.84□□□□□ -1.79
CIITAP33076 AC090970.3-201ENST00000612566 866 ntBASIC3.84□□□□□ -1.79
CIITAP33076 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.84□□□□□ -1.79
CIITAP33076 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CIITAP33076 AC084757.4-201ENST00000616350 526 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AL356321.1-201ENST00000621360 228 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AC110801.1-201ENST00000623590 212 ntBASIC3.84□□□□□ -1.79
CIITAP33076 U6.98-201ENST00000637157 84 ntBASIC3.84□□□□□ -1.79
CIITAP33076 AC010149.2-201ENST00000637608 315 ntBASIC3.84□□□□□ -1.79
CIITAP33076 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms