Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC114797.1-201ENST00000514003 728 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 MTND5P4-201ENST00000514978 288 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AC110760.3-202ENST00000515177 371 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AP002404.1-201ENST00000532005 451 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DPA1P20036 VN1R92P-201ENST00000598511 928 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 MTND4LP5-201ENST00000605152 292 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AC005000.2-201ENST00000605468 310 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AC131902.3-201ENST00000611767 581 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AL356596.1-201ENST00000624230 379 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DPA1P20036 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DPA1P20036 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DPA1P20036 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HLA-DPA1P20036 AC093831.2-201ENST00000624393 3427 ntBASIC3.01□□□□□ -1.93
HLA-DPA1P20036 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DPA1P20036 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DPA1P20036 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPA1P20036 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPA1P20036 GNG5P1-201ENST00000255500 204 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPA1P20036 RNU6-525P-201ENST00000363685 104 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 RNU6-723P-201ENST00000383973 107 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 MIR627-201ENST00000384979 97 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 PIGPP2-201ENST00000411569 458 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 Z92545.1-201ENST00000411782 234 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DPA1P20036 FAM103A2P-201ENST00000444122 354 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPA1P20036 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPA1P20036 RSL24D1P3-201ENST00000449255 495 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 AL590639.1-201ENST00000456484 337 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPA1P20036 RPL23AP70-201ENST00000483361 460 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 AL160314.1-201ENST00000490836 438 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DPA1P20036 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DPA1P20036 MRPS36P2-201ENST00000512569 299 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPA1P20036 SUB1P1-201ENST00000524415 382 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPA1P20036 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPA1P20036 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DPA1P20036 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPA1P20036 AC025281.1-201ENST00000567026 265 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPA1P20036 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPA1P20036 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DPA1P20036 AC103810.1-201ENST00000579873 453 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 AL160281.1-201ENST00000605307 311 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPA1P20036 AC072039.2-201ENST00000608883 439 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 AC008498.1-201ENST00000613012 531 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 AC079395.3-201ENST00000615161 484 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 ZNF833P-201ENST00000424938 1494 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HLA-DPA1P20036 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPA1P20036 MTND5P7-201ENST00000413558 1798 ntBASIC3□□□□□ -1.93
HLA-DPA1P20036 CCT4P2-201ENST00000233836 1548 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 MTND5P33-201ENST00000571250 1450 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 RNU6-884P-201ENST00000363889 107 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 SNORA48.2-201ENST00000390926 124 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 RPL21P24-201ENST00000413752 448 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 USP12PX-201ENST00000432383 1057 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 OR2B8P-201ENST00000432841 938 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 RPS29P2-201ENST00000479278 136 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC106872.3-201ENST00000495104 446 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC113155.1-201ENST00000511141 769 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 HSPE1P20-201ENST00000538133 289 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 GLYCAM1-201ENST00000546596 285 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AL133153.1-201ENST00000557756 303 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 H3F3AP1-201ENST00000559984 334 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 MTND1P8-201ENST00000571424 950 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC097468.3-201ENST00000607956 456 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC239868.4-201ENST00000608318 671 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC004908.2-201ENST00000609090 574 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 AC108206.1-201ENST00000570186 4159 ntBASIC2.99□□□□□ -1.93
HLA-DPA1P20036 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms