Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC090888.1-201ENST00000561335 1141 ntBASIC2.54□□□□□ -2
NCK1P16333 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.54□□□□□ -2
NCK1P16333 AL160237.3-201ENST00000604114 1013 ntBASIC2.54□□□□□ -2
NCK1P16333 AL592221.1-201ENST00000605266 382 ntBASIC2.54□□□□□ -2
NCK1P16333 AC112220.3-201ENST00000605502 502 ntBASIC2.54□□□□□ -2
NCK1P16333 FTX_3.1-201ENST00000610451 147 ntBASIC2.54□□□□□ -2
NCK1P16333 AC096577.2-201ENST00000611455 153 ntBASIC2.54□□□□□ -2
NCK1P16333 AC010133.1-201ENST00000615809 842 ntBASIC2.54□□□□□ -2
NCK1P16333 ATP5A1P2-202ENST00000616464 443 ntBASIC2.54□□□□□ -2
NCK1P16333 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.54□□□□□ -2
NCK1P16333 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
NCK1P16333 AC096644.4-201ENST00000563417 2912 ntBASIC2.54□□□□□ -2
NCK1P16333 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NCK1P16333 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.53□□□□□ -2
NCK1P16333 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.53□□□□□ -2
NCK1P16333 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.53□□□□□ -2
NCK1P16333 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NCK1P16333 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.53□□□□□ -2
NCK1P16333 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NCK1P16333 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.53□□□□□ -2
NCK1P16333 SNORA68.1-201ENST00000364537 132 ntBASIC2.53□□□□□ -2
NCK1P16333 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NCK1P16333 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
NCK1P16333 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
NCK1P16333 RNVU1-14-201ENST00000384770 164 ntBASIC2.53□□□□□ -2
NCK1P16333 MIR491-201ENST00000384877 84 ntBASIC2.53□□□□□ -2
NCK1P16333 MIR620-201ENST00000385232 95 ntBASIC2.53□□□□□ -2
NCK1P16333 SNORA48.5-201ENST00000391143 135 ntBASIC2.53□□□□□ -2
NCK1P16333 RPL17P12-201ENST00000413391 526 ntBASIC2.53□□□□□ -2
NCK1P16333 AL592148.1-201ENST00000413568 445 ntBASIC2.53□□□□□ -2
NCK1P16333 HMGB1P49-201ENST00000418882 569 ntBASIC2.53□□□□□ -2
NCK1P16333 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
NCK1P16333 RPS25P9-201ENST00000435591 252 ntBASIC2.53□□□□□ -2
NCK1P16333 AC013267.1-201ENST00000458227 267 ntBASIC2.53□□□□□ -2
NCK1P16333 AC135721.1-201ENST00000497954 479 ntBASIC2.53□□□□□ -2
NCK1P16333 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.53□□□□□ -2
NCK1P16333 AC026427.2-201ENST00000506228 536 ntBASIC2.53□□□□□ -2
NCK1P16333 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.53□□□□□ -2
NCK1P16333 AC090136.1-201ENST00000520009 240 ntBASIC2.53□□□□□ -2
NCK1P16333 AC022634.1-201ENST00000520765 532 ntBASIC2.53□□□□□ -2
NCK1P16333 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NCK1P16333 AC123904.3-201ENST00000547218 814 ntBASIC2.53□□□□□ -2
NCK1P16333 AL391261.3-201ENST00000557194 520 ntBASIC2.53□□□□□ -2
NCK1P16333 AC025281.1-201ENST00000567026 265 ntBASIC2.53□□□□□ -2
NCK1P16333 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.53□□□□□ -2
NCK1P16333 AC010546.1-201ENST00000569391 485 ntBASIC2.53□□□□□ -2
NCK1P16333 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.53□□□□□ -2
NCK1P16333 MIR4635-201ENST00000583759 79 ntBASIC2.53□□□□□ -2
NCK1P16333 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.53□□□□□ -2
NCK1P16333 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.53□□□□□ -2
NCK1P16333 AC024153.1-201ENST00000603103 365 ntBASIC2.53□□□□□ -2
NCK1P16333 AC136601.2-201ENST00000604356 474 ntBASIC2.53□□□□□ -2
NCK1P16333 AL139344.1-201ENST00000605228 195 ntBASIC2.53□□□□□ -2
NCK1P16333 AC005014.3-201ENST00000605985 190 ntBASIC2.53□□□□□ -2
NCK1P16333 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NCK1P16333 SDR42E1P2-201ENST00000614861 481 ntBASIC2.53□□□□□ -2
NCK1P16333 AC079395.3-201ENST00000615161 484 ntBASIC2.53□□□□□ -2
NCK1P16333 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.53□□□□□ -2
NCK1P16333 UCA1.1-201ENST00000620952 75 ntBASIC2.53□□□□□ -2
NCK1P16333 PCMTD1P7-201ENST00000634506 357 ntBASIC2.53□□□□□ -2
NCK1P16333 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NCK1P16333 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NCK1P16333 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
NCK1P16333 RNA5SP374-201ENST00000362939 125 ntBASIC2.52□□□□□ -2.01
NCK1P16333 RNU1-109P-201ENST00000383960 147 ntBASIC2.52□□□□□ -2.01
NCK1P16333 RNU6-432P-201ENST00000384196 109 ntBASIC2.52□□□□□ -2.01
NCK1P16333 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.52□□□□□ -2.01
NCK1P16333 USP9YP13-201ENST00000417797 480 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AC083875.1-201ENST00000419509 405 ntBASIC2.52□□□□□ -2.01
NCK1P16333 RPL7P37-201ENST00000425095 738 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AC091390.3-201ENST00000426478 338 ntBASIC2.52□□□□□ -2.01
NCK1P16333 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.52□□□□□ -2.01
NCK1P16333 TXNL1P1-201ENST00000429528 554 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.52□□□□□ -2.01
NCK1P16333 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.52□□□□□ -2.01
NCK1P16333 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.52□□□□□ -2.01
NCK1P16333 CYCSP32-201ENST00000440548 321 ntBASIC2.52□□□□□ -2.01
NCK1P16333 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.52□□□□□ -2.01
NCK1P16333 EXOSC3P1-201ENST00000448649 500 ntBASIC2.52□□□□□ -2.01
NCK1P16333 RPS15AP27-201ENST00000449183 343 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AC092155.2-201ENST00000454675 477 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.52□□□□□ -2.01
NCK1P16333 AC005410.1-202ENST00000460347 485 ntBASIC2.52□□□□□ -2.01
NCK1P16333 RPS29P26-201ENST00000477483 171 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AL358832.1-201ENST00000497800 389 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AC093809.1-201ENST00000509155 340 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.52□□□□□ -2.01
NCK1P16333 AC074250.1-201ENST00000511117 192 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AC010587.2-201ENST00000511727 448 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.52□□□□□ -2.01
NCK1P16333 HMGB1P41-201ENST00000520234 440 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.52□□□□□ -2.01
NCK1P16333 AC100870.1-201ENST00000522035 505 ntBASIC2.52□□□□□ -2.01
NCK1P16333 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.52□□□□□ -2.01
NCK1P16333 AC005951.2-201ENST00000576282 495 ntBASIC2.52□□□□□ -2.01
NCK1P16333 MIR4509-3-201ENST00000578671 94 ntBASIC2.52□□□□□ -2.01
NCK1P16333 MIR4509-2-201ENST00000583920 94 ntBASIC2.52□□□□□ -2.01
NCK1P16333 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.52□□□□□ -2.01
NCK1P16333 AC006539.2-201ENST00000601729 572 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms