Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AP000770.2-201ENST00000623694 100 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PDGFRAP16234 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDGFRAP16234 ZNF833P-201ENST00000424938 1494 ntBASIC3.22□□□□□ -1.89
PDGFRAP16234 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.89
PDGFRAP16234 RNU6-799P-201ENST00000363567 107 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 SNORA46-201ENST00000384762 135 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 MIR19A-201ENST00000384878 82 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 SNORA48.5-201ENST00000391143 135 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC245054.2-201ENST00000415639 319 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 UBE2FP1-201ENST00000416536 447 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.21□□□□□ -1.9
PDGFRAP16234 SAR1AP4-201ENST00000429225 591 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC109583.1-201ENST00000432156 268 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.21□□□□□ -1.9
PDGFRAP16234 RN7SL20P-201ENST00000488827 297 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC055855.1-201ENST00000489563 579 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 RNA5SP341-201ENST00000516261 117 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC245166.1-201ENST00000521012 253 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDGFRAP16234 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AP000857.1-201ENST00000532151 543 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.21□□□□□ -1.9
PDGFRAP16234 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AC007954.1-201ENST00000554198 494 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 HMGB1P14-201ENST00000557424 591 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.21□□□□□ -1.9
PDGFRAP16234 ACTR3BP3-201ENST00000565577 979 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AP000403.1-201ENST00000603349 851 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC018638.7-201ENST00000605836 1114 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC004696.1-201ENST00000614345 607 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 AC010133.1-201ENST00000615809 842 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PDGFRAP16234 AC112204.3-201ENST00000623822 332 ntBASIC3.21□□□□□ -1.9
PDGFRAP16234 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.21□□□□□ -1.9
PDGFRAP16234 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
PDGFRAP16234 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.21□□□□□ -1.9
PDGFRAP16234 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PDGFRAP16234 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFRAP16234 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.2□□□□□ -1.9
PDGFRAP16234 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
PDGFRAP16234 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFRAP16234 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFRAP16234 MIR422A-201ENST00000362286 90 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 RNU1-39P-201ENST00000383897 165 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 AL031121.1-201ENST00000406553 254 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFRAP16234 AC005005.2-201ENST00000420779 380 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.2□□□□□ -1.9
PDGFRAP16234 OR2B8P-201ENST00000432841 938 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 MTCO3P45-201ENST00000443036 613 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFRAP16234 RNU6-420P-201ENST00000458780 107 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 RNU7-59P-201ENST00000459101 61 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFRAP16234 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFRAP16234 TTC39CP1-201ENST00000512513 755 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 RNU6-1282P-201ENST00000516735 96 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 RNA5SP380-201ENST00000517190 98 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 NRON-201ENST00000517270 370 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.2□□□□□ -1.9
PDGFRAP16234 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.2□□□□□ -1.9
PDGFRAP16234 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
PDGFRAP16234 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFRAP16234 AC010653.1-201ENST00000571108 881 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.2□□□□□ -1.9
PDGFRAP16234 MIR4325-201ENST00000583049 90 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 AC068790.3-201ENST00000602988 553 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 DUXAP4-201ENST00000603046 613 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 Z99289.3-201ENST00000605586 594 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.2□□□□□ -1.9
PDGFRAP16234 AC007038.2-201ENST00000608095 740 ntBASIC3.2□□□□□ -1.9
PDGFRAP16234 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFRAP16234 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFRAP16234 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PDGFRAP16234 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PDGFRAP16234 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFRAP16234 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.19□□□□□ -1.9
PDGFRAP16234 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PDGFRAP16234 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFRAP16234 GNG5P1-201ENST00000255500 204 ntBASIC3.19□□□□□ -1.9
PDGFRAP16234 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PDGFRAP16234 Y_RNA.97-201ENST00000363094 102 ntBASIC3.19□□□□□ -1.9
PDGFRAP16234 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDGFRAP16234 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
PDGFRAP16234 Z92545.1-201ENST00000411782 234 ntBASIC3.19□□□□□ -1.9
PDGFRAP16234 SPA17P1-201ENST00000416656 452 ntBASIC3.19□□□□□ -1.9
PDGFRAP16234 RPS27AP14-201ENST00000422868 454 ntBASIC3.19□□□□□ -1.9
PDGFRAP16234 AC012498.1-201ENST00000424037 437 ntBASIC3.19□□□□□ -1.9
PDGFRAP16234 MTND4P20-201ENST00000424125 869 ntBASIC3.19□□□□□ -1.9
PDGFRAP16234 OR2AS1P-201ENST00000427827 319 ntBASIC3.19□□□□□ -1.9
PDGFRAP16234 AL390023.1-201ENST00000428836 262 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms