Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 RPS20P5-201ENST00000434808 360 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 HMGB3P12-201ENST00000438745 556 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 MTCO3P45-201ENST00000443036 613 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DOBP13765 HMGN2P21-201ENST00000447764 270 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 AL645939.1-201ENST00000453429 797 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 SNORD97-201ENST00000459187 142 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC008481.1-201ENST00000463278 396 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 FAM92A1P2-202ENST00000504766 877 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 PRDX4P1-201ENST00000507189 574 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 SNORA70.18-201ENST00000516696 98 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 SNORA31.20-201ENST00000517111 133 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 FAM60DP-201ENST00000524174 632 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC104383.1-201ENST00000530297 370 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC123904.3-201ENST00000547218 814 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC125611.2-201ENST00000551907 647 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 MTCO3P24-201ENST00000572729 782 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 Z84480.1-201ENST00000605131 311 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 SNHG22-203ENST00000617833 660 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DOBP13765 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DOBP13765 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 TAB3P1-202ENST00000452645 1634 ntBASIC3.21□□□□□ -1.9
HLA-DOBP13765 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
HLA-DOBP13765 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DOBP13765 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DOBP13765 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DOBP13765 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 SNORD9-201ENST00000362566 104 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 RNU6-1090P-201ENST00000364065 94 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 RNU6-483P-201ENST00000384088 108 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 PPP1R11P2-201ENST00000423543 382 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AC002075.2-201ENST00000425207 252 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AC006989.1-201ENST00000427212 131 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DOBP13765 RPL7P54-201ENST00000438336 674 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 MTND4P18-201ENST00000447010 465 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 WASF1P1-201ENST00000447560 1131 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 AC083798.1-201ENST00000472671 131 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 RPL36AP51-201ENST00000487216 318 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 AC116353.2-201ENST00000505332 712 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 HSPD1P15-201ENST00000505573 1122 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 Vault.1-201ENST00000516474 102 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 Y_RNA.704-201ENST00000516851 102 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 MIR4738-201ENST00000579134 87 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 AL162413.1-201ENST00000603198 110 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AL022099.1-201ENST00000604551 712 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AP002360.4-201ENST00000606980 481 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AP001596.2-201ENST00000608410 312 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 AC093788.1-201ENST00000609356 927 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 uc_338.32-201ENST00000615087 172 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 ZNF680P1-201ENST00000436625 1469 ntBASIC3.2□□□□□ -1.9
HLA-DOBP13765 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DOBP13765 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DOBP13765 RPS4XP5-202ENST00000449995 1334 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC073343.1-201ENST00000328239 651 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 Y_RNA.22-201ENST00000362492 102 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 SNORA23-201ENST00000365128 182 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 RNU6-606P-201ENST00000384721 111 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 MIR1-2-201ENST00000384961 85 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 RPL21P17-201ENST00000397467 475 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DOBP13765 MRPL50P2-201ENST00000416821 482 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 MTATP6P23-201ENST00000440153 476 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 MTCO3P18-201ENST00000440206 761 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms