Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MFSD8-213ENST00000641134 1327 ntBASIC1.13□□□□□ -2.23
VCANP13611 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.13□□□□□ -2.23
VCANP13611 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.13□□□□□ -2.23
VCANP13611 PRELID3BP4-201ENST00000515476 571 ntBASIC1.13□□□□□ -2.23
VCANP13611 SNORA31.16-201ENST00000516773 139 ntBASIC1.13□□□□□ -2.23
VCANP13611 Y_RNA.142-201ENST00000363491 102 ntBASIC1.13□□□□□ -2.23
VCANP13611 AC005912.1-201ENST00000495392 255 ntBASIC1.13□□□□□ -2.23
VCANP13611 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.13□□□□□ -2.23
VCANP13611 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.13□□□□□ -2.23
VCANP13611 AC010928.2-201ENST00000588017 287 ntBASIC1.13□□□□□ -2.23
VCANP13611 BNIP3P26-201ENST00000600827 554 ntBASIC1.13□□□□□ -2.23
VCANP13611 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.13□□□□□ -2.23
VCANP13611 AC090740.1-201ENST00000623193 2262 ntBASIC1.12□□□□□ -2.23
VCANP13611 RNU6-288P-201ENST00000363690 104 ntBASIC1.12□□□□□ -2.23
VCANP13611 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
VCANP13611 AC007390.1-201ENST00000415722 356 ntBASIC1.12□□□□□ -2.23
VCANP13611 AC007098.1-201ENST00000420122 367 ntBASIC1.12□□□□□ -2.23
VCANP13611 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.12□□□□□ -2.23
VCANP13611 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.12□□□□□ -2.23
VCANP13611 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
VCANP13611 RNU1-52P-201ENST00000384190 164 ntBASIC1.12□□□□□ -2.23
VCANP13611 AC138473.1-201ENST00000605717 526 ntBASIC1.12□□□□□ -2.23
VCANP13611 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.12□□□□□ -2.23
VCANP13611 DPPA3P1-201ENST00000448050 469 ntBASIC1.11□□□□□ -2.23
VCANP13611 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.11□□□□□ -2.23
VCANP13611 CR382285.2-201ENST00000624662 1495 ntBASIC1.11□□□□□ -2.23
VCANP13611 RNU6-173P-201ENST00000364215 104 ntBASIC1.11□□□□□ -2.23
VCANP13611 MIR1912-201ENST00000410389 80 ntBASIC1.11□□□□□ -2.23
VCANP13611 RPS27P1-201ENST00000450552 247 ntBASIC1.11□□□□□ -2.23
VCANP13611 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.11□□□□□ -2.23
VCANP13611 AC146944.4-201ENST00000602697 718 ntBASIC1.11□□□□□ -2.23
VCANP13611 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
VCANP13611 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.11□□□□□ -2.23
VCANP13611 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.11□□□□□ -2.23
VCANP13611 FO393415.2-201ENST00000480085 343 ntBASIC1.11□□□□□ -2.23
VCANP13611 AC093281.2-201ENST00000510153 597 ntBASIC1.11□□□□□ -2.23
VCANP13611 PDCD5P1-201ENST00000543528 309 ntBASIC1.11□□□□□ -2.23
VCANP13611 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.11□□□□□ -2.23
VCANP13611 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.11□□□□□ -2.23
VCANP13611 VN1R79P-201ENST00000593540 513 ntBASIC1.11□□□□□ -2.23
VCANP13611 AC116618.1-201ENST00000634617 774 ntBASIC1.11□□□□□ -2.23
VCANP13611 AL354685.2-201ENST00000448218 1447 ntBASIC1.11□□□□□ -2.23
VCANP13611 AC093852.1-201ENST00000503587 266 ntBASIC1.1□□□□□ -2.23
VCANP13611 NDUFB4P9-201ENST00000511646 388 ntBASIC1.1□□□□□ -2.23
VCANP13611 MIR5589-201ENST00000579442 60 ntBASIC1.1□□□□□ -2.23
VCANP13611 AC024619.4-201ENST00000580924 316 ntBASIC1.1□□□□□ -2.23
VCANP13611 MIR6759-201ENST00000638110 65 ntBASIC1.1□□□□□ -2.23
VCANP13611 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.1□□□□□ -2.23
VCANP13611 ZNF37BP-203ENST00000452306 1352 ntBASIC1.1□□□□□ -2.23
VCANP13611 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.1□□□□□ -2.23
VCANP13611 RNU4-31P-201ENST00000384211 141 ntBASIC1.1□□□□□ -2.23
VCANP13611 RPL5P19-201ENST00000404228 893 ntBASIC1.1□□□□□ -2.23
VCANP13611 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
VCANP13611 OR4V1P-201ENST00000525394 1140 ntBASIC1.1□□□□□ -2.23
VCANP13611 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.1□□□□□ -2.23
VCANP13611 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.1□□□□□ -2.23
VCANP13611 DEFB108E-201ENST00000524692 240 ntBASIC1.1□□□□□ -2.23
VCANP13611 MTND5P21-201ENST00000531961 522 ntBASIC1.1□□□□□ -2.23
VCANP13611 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
VCANP13611 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.09□□□□□ -2.23
VCANP13611 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.09□□□□□ -2.23
VCANP13611 AC025918.2-201ENST00000558683 763 ntBASIC1.09□□□□□ -2.23
VCANP13611 FAM157A-202ENST00000615155 405 ntBASIC1.09□□□□□ -2.23
VCANP13611 AL356118.1-201ENST00000635272 1078 ntBASIC1.09□□□□□ -2.23
VCANP13611 AC103710.2-202ENST00000641454 2853 ntBASIC1.09□□□□□ -2.24
VCANP13611 RPL9P9-202ENST00000466501 579 ntBASIC1.09□□□□□ -2.24
VCANP13611 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.09□□□□□ -2.24
VCANP13611 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.09□□□□□ -2.24
VCANP13611 uc_338.22-201ENST00000622722 187 ntBASIC1.09□□□□□ -2.24
VCANP13611 HMGB1P49-201ENST00000418882 569 ntBASIC1.08□□□□□ -2.24
VCANP13611 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.08□□□□□ -2.24
VCANP13611 CBX3P7-201ENST00000532876 502 ntBASIC1.08□□□□□ -2.24
VCANP13611 AP003117.1-201ENST00000602771 554 ntBASIC1.08□□□□□ -2.24
VCANP13611 AL136164.4-201ENST00000625013 2135 ntBASIC1.08□□□□□ -2.24
VCANP13611 RNA5SP465-201ENST00000391195 109 ntBASIC1.08□□□□□ -2.24
VCANP13611 AC090515.1-201ENST00000465295 476 ntBASIC1.08□□□□□ -2.24
VCANP13611 RPS15AP34-201ENST00000487776 387 ntBASIC1.08□□□□□ -2.24
VCANP13611 AC104806.1-201ENST00000508720 308 ntBASIC1.08□□□□□ -2.24
VCANP13611 SNORA31.26-201ENST00000517250 137 ntBASIC1.08□□□□□ -2.24
VCANP13611 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.08□□□□□ -2.24
VCANP13611 MIR4636-201ENST00000582271 80 ntBASIC1.08□□□□□ -2.24
VCANP13611 RNU6-17P-201ENST00000384245 107 ntBASIC1.08□□□□□ -2.24
VCANP13611 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
VCANP13611 RPL31P63-201ENST00000422565 375 ntBASIC1.08□□□□□ -2.24
VCANP13611 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.08□□□□□ -2.24
VCANP13611 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.08□□□□□ -2.24
VCANP13611 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.08□□□□□ -2.24
VCANP13611 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.08□□□□□ -2.24
VCANP13611 DUXAP3-201ENST00000603616 594 ntBASIC1.08□□□□□ -2.24
VCANP13611 AC097655.1-201ENST00000635075 318 ntBASIC1.08□□□□□ -2.24
VCANP13611 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.08□□□□□ -2.24
VCANP13611 NUP35P2-201ENST00000416748 943 ntBASIC1.07□□□□□ -2.24
VCANP13611 Z95118.1-201ENST00000421372 247 ntBASIC1.07□□□□□ -2.24
VCANP13611 OR51B8P-201ENST00000449892 769 ntBASIC1.07□□□□□ -2.24
VCANP13611 RPL26P9-201ENST00000457466 433 ntBASIC1.07□□□□□ -2.24
VCANP13611 AC108706.1-201ENST00000611053 297 ntBASIC1.07□□□□□ -2.24
VCANP13611 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
VCANP13611 AL512430.2-201ENST00000406786 339 ntBASIC1.07□□□□□ -2.24
VCANP13611 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.07□□□□□ -2.24
VCANP13611 RPS20P10-201ENST00000451209 253 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms