Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC007229.1-201ENST00000590455 412 ntBASIC2.14□□□□□ -2.07
CFTRP13569 AC245036.5-201ENST00000596330 847 ntBASIC2.14□□□□□ -2.07
CFTRP13569 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.13□□□□□ -2.07
CFTRP13569 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.13□□□□□ -2.07
CFTRP13569 RNU6-666P-201ENST00000363499 107 ntBASIC2.13□□□□□ -2.07
CFTRP13569 SNORA14A-201ENST00000364773 135 ntBASIC2.13□□□□□ -2.07
CFTRP13569 RNU6-317P-201ENST00000384031 107 ntBASIC2.13□□□□□ -2.07
CFTRP13569 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.13□□□□□ -2.07
CFTRP13569 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.13□□□□□ -2.07
CFTRP13569 RPS6P14-201ENST00000425165 719 ntBASIC2.13□□□□□ -2.07
CFTRP13569 AC244033.1-201ENST00000426826 870 ntBASIC2.13□□□□□ -2.07
CFTRP13569 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.13□□□□□ -2.07
CFTRP13569 MTND2P8-201ENST00000450555 1025 ntBASIC2.13□□□□□ -2.07
CFTRP13569 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.13□□□□□ -2.07
CFTRP13569 snoU109.4-201ENST00000458953 143 ntBASIC2.13□□□□□ -2.07
CFTRP13569 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.13□□□□□ -2.07
CFTRP13569 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CFTRP13569 SEM1P1-201ENST00000506694 209 ntBASIC2.13□□□□□ -2.07
CFTRP13569 RNA5SP468-201ENST00000516782 93 ntBASIC2.13□□□□□ -2.07
CFTRP13569 RN7SKP277-201ENST00000516895 283 ntBASIC2.13□□□□□ -2.07
CFTRP13569 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.13□□□□□ -2.07
CFTRP13569 AC109635.4-202ENST00000531666 412 ntBASIC2.13□□□□□ -2.07
CFTRP13569 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.13□□□□□ -2.07
CFTRP13569 AL133370.2-201ENST00000619934 439 ntBASIC2.13□□□□□ -2.07
CFTRP13569 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
CFTRP13569 HNRNPDP2-201ENST00000406475 478 ntBASIC2.12□□□□□ -2.07
CFTRP13569 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.12□□□□□ -2.07
CFTRP13569 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.12□□□□□ -2.07
CFTRP13569 PSMA2P3-201ENST00000429685 675 ntBASIC2.12□□□□□ -2.07
CFTRP13569 AC005297.2-201ENST00000450430 606 ntBASIC2.12□□□□□ -2.07
CFTRP13569 MTND3P6-201ENST00000485242 339 ntBASIC2.12□□□□□ -2.07
CFTRP13569 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.12□□□□□ -2.07
CFTRP13569 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.12□□□□□ -2.07
CFTRP13569 DUXAP5-201ENST00000529668 529 ntBASIC2.12□□□□□ -2.07
CFTRP13569 MIR5694-201ENST00000581190 76 ntBASIC2.12□□□□□ -2.07
CFTRP13569 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CFTRP13569 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CFTRP13569 MTATP6P4-201ENST00000427725 675 ntBASIC2.11□□□□□ -2.07
CFTRP13569 MTND4LP16-201ENST00000440828 295 ntBASIC2.11□□□□□ -2.07
CFTRP13569 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.11□□□□□ -2.07
CFTRP13569 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.11□□□□□ -2.07
CFTRP13569 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.11□□□□□ -2.07
CFTRP13569 MIR4285-201ENST00000581001 85 ntBASIC2.11□□□□□ -2.07
CFTRP13569 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.11□□□□□ -2.07
CFTRP13569 AC012213.4-201ENST00000606457 354 ntBASIC2.11□□□□□ -2.07
CFTRP13569 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CFTRP13569 AL161722.3-201ENST00000605789 2983 ntBASIC2.1□□□□□ -2.07
CFTRP13569 MIR373-201ENST00000362273 69 ntBASIC2.1□□□□□ -2.07
CFTRP13569 RNA5SP391-201ENST00000363456 119 ntBASIC2.1□□□□□ -2.07
CFTRP13569 RNU6-1181P-201ENST00000384191 106 ntBASIC2.1□□□□□ -2.07
CFTRP13569 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.1□□□□□ -2.07
CFTRP13569 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.1□□□□□ -2.07
CFTRP13569 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.1□□□□□ -2.07
CFTRP13569 SNRPEP4-201ENST00000435815 279 ntBASIC2.1□□□□□ -2.07
CFTRP13569 MTCYBP29-201ENST00000436327 1006 ntBASIC2.1□□□□□ -2.07
CFTRP13569 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.1□□□□□ -2.07
CFTRP13569 NOP56P3-201ENST00000549457 385 ntBASIC2.1□□□□□ -2.07
CFTRP13569 AC125611.2-201ENST00000551907 647 ntBASIC2.1□□□□□ -2.07
CFTRP13569 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.1□□□□□ -2.07
CFTRP13569 AC115085.1-201ENST00000588924 229 ntBASIC2.1□□□□□ -2.07
CFTRP13569 AC009220.3-201ENST00000604318 586 ntBASIC2.1□□□□□ -2.07
CFTRP13569 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.1□□□□□ -2.07
CFTRP13569 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.1□□□□□ -2.07
CFTRP13569 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
CFTRP13569 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.09□□□□□ -2.07
CFTRP13569 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CFTRP13569 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CFTRP13569 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CFTRP13569 RNU6-1180P-201ENST00000364935 107 ntBASIC2.09□□□□□ -2.07
CFTRP13569 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.09□□□□□ -2.07
CFTRP13569 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CFTRP13569 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.09□□□□□ -2.07
CFTRP13569 AL078601.1-201ENST00000444542 271 ntBASIC2.09□□□□□ -2.07
CFTRP13569 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.09□□□□□ -2.07
CFTRP13569 AC090515.1-201ENST00000465295 476 ntBASIC2.09□□□□□ -2.07
CFTRP13569 AC010301.1-201ENST00000473936 355 ntBASIC2.09□□□□□ -2.07
CFTRP13569 AC009901.1-201ENST00000506703 541 ntBASIC2.09□□□□□ -2.07
CFTRP13569 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.09□□□□□ -2.07
CFTRP13569 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.09□□□□□ -2.07
CFTRP13569 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.09□□□□□ -2.07
CFTRP13569 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.09□□□□□ -2.07
CFTRP13569 HSPE1P14-201ENST00000605812 302 ntBASIC2.09□□□□□ -2.07
CFTRP13569 AC126118.1-201ENST00000607744 628 ntBASIC2.09□□□□□ -2.07
CFTRP13569 AL590282.1-201ENST00000610379 1136 ntBASIC2.09□□□□□ -2.07
CFTRP13569 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CFTRP13569 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.09□□□□□ -2.07
CFTRP13569 MKKS-204ENST00000639674 192 ntBASIC2.09□□□□□ -2.07
CFTRP13569 RNU6-799P-201ENST00000363567 107 ntBASIC2.08□□□□□ -2.08
CFTRP13569 Y_RNA.374-201ENST00000365606 101 ntBASIC2.08□□□□□ -2.08
CFTRP13569 AC233728.2-201ENST00000425348 757 ntBASIC2.08□□□□□ -2.08
CFTRP13569 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.08□□□□□ -2.08
CFTRP13569 LSM1P1-201ENST00000438629 273 ntBASIC2.08□□□□□ -2.08
CFTRP13569 BMI1P1-201ENST00000445879 941 ntBASIC2.08□□□□□ -2.08
CFTRP13569 AC087879.1-201ENST00000474343 374 ntBASIC2.08□□□□□ -2.08
CFTRP13569 AC010625.1-201ENST00000511296 403 ntBASIC2.08□□□□□ -2.08
CFTRP13569 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.08□□□□□ -2.08
CFTRP13569 AC087373.1-201ENST00000524920 491 ntBASIC2.08□□□□□ -2.08
CFTRP13569 AC010928.2-201ENST00000588017 287 ntBASIC2.08□□□□□ -2.08
CFTRP13569 PCNAP1-202ENST00000595299 752 ntBASIC2.08□□□□□ -2.08
CFTRP13569 AC008962.1-201ENST00000605729 304 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms