Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.52□□□□□ -1.85
PCNAP12004 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 AC012182.1-201ENST00000570133 895 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AF038458.1-201ENST00000588406 262 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AC245014.2-201ENST00000603689 287 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AC246785.4-201ENST00000605374 287 ntBASIC3.52□□□□□ -1.85
PCNAP12004 AC026585.1-201ENST00000619582 524 ntBASIC3.52□□□□□ -1.85
PCNAP12004 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCNAP12004 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
PCNAP12004 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCNAP12004 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
PCNAP12004 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.51□□□□□ -1.85
PCNAP12004 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.51□□□□□ -1.85
PCNAP12004 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCNAP12004 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCNAP12004 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.51□□□□□ -1.85
PCNAP12004 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PCNAP12004 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCNAP12004 Y_RNA.296-201ENST00000364930 108 ntBASIC3.51□□□□□ -1.85
PCNAP12004 RNU6-169P-201ENST00000365336 107 ntBASIC3.51□□□□□ -1.85
PCNAP12004 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCNAP12004 AL136372.1-201ENST00000403060 228 ntBASIC3.51□□□□□ -1.85
PCNAP12004 MIR1193-201ENST00000408109 78 ntBASIC3.51□□□□□ -1.85
PCNAP12004 RNU2-36P-201ENST00000410361 191 ntBASIC3.51□□□□□ -1.85
PCNAP12004 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.51□□□□□ -1.85
PCNAP12004 GAPDHP27-201ENST00000447427 1020 ntBASIC3.51□□□□□ -1.85
PCNAP12004 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.51□□□□□ -1.85
PCNAP12004 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.51□□□□□ -1.85
PCNAP12004 SRRM1P2-201ENST00000464531 1192 ntBASIC3.51□□□□□ -1.85
PCNAP12004 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.51□□□□□ -1.85
PCNAP12004 AC010631.1-201ENST00000474150 156 ntBASIC3.51□□□□□ -1.85
PCNAP12004 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.51□□□□□ -1.85
PCNAP12004 AC107401.1-201ENST00000503426 685 ntBASIC3.51□□□□□ -1.85
PCNAP12004 KCTD9P5-201ENST00000504141 1170 ntBASIC3.51□□□□□ -1.85
PCNAP12004 AC108078.1-201ENST00000508073 725 ntBASIC3.51□□□□□ -1.85
PCNAP12004 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
PCNAP12004 MTND4LP31-201ENST00000514859 294 ntBASIC3.51□□□□□ -1.85
PCNAP12004 HMGN1P28-201ENST00000521340 364 ntBASIC3.51□□□□□ -1.85
PCNAP12004 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.51□□□□□ -1.85
PCNAP12004 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.51□□□□□ -1.85
PCNAP12004 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.51□□□□□ -1.85
PCNAP12004 AC010546.1-201ENST00000569391 485 ntBASIC3.51□□□□□ -1.85
PCNAP12004 MIR5187-201ENST00000583479 76 ntBASIC3.51□□□□□ -1.85
PCNAP12004 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.51□□□□□ -1.85
PCNAP12004 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.51□□□□□ -1.85
PCNAP12004 AC008277.2-201ENST00000605196 797 ntBASIC3.51□□□□□ -1.85
PCNAP12004 AF250324.2-201ENST00000608299 610 ntBASIC3.51□□□□□ -1.85
PCNAP12004 AL355810.1-201ENST00000614629 552 ntBASIC3.51□□□□□ -1.85
PCNAP12004 AC068792.1-201ENST00000621354 417 ntBASIC3.51□□□□□ -1.85
PCNAP12004 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.51□□□□□ -1.85
PCNAP12004 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.51□□□□□ -1.85
PCNAP12004 AL732372.2-225ENST00000642124 456 ntBASIC3.51□□□□□ -1.85
PCNAP12004 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCNAP12004 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
PCNAP12004 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCNAP12004 AC027514.1-201ENST00000588561 1603 ntBASIC3.51□□□□□ -1.85
PCNAP12004 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.51□□□□□ -1.85
PCNAP12004 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCNAP12004 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCNAP12004 AC007656.2-201ENST00000624902 4547 ntBASIC3.5□□□□□ -1.85
PCNAP12004 AC058791.1-201ENST00000608412 3198 ntBASIC3.5□□□□□ -1.85
PCNAP12004 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PCNAP12004 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCNAP12004 RNU6-181P-201ENST00000363225 107 ntBASIC3.5□□□□□ -1.85
PCNAP12004 RNU6-173P-201ENST00000364215 104 ntBASIC3.5□□□□□ -1.85
PCNAP12004 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.5□□□□□ -1.85
PCNAP12004 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.5□□□□□ -1.85
PCNAP12004 AC017079.2-201ENST00000416102 485 ntBASIC3.5□□□□□ -1.85
PCNAP12004 PIGFP2-201ENST00000421400 651 ntBASIC3.5□□□□□ -1.85
PCNAP12004 AC093106.2-201ENST00000428212 385 ntBASIC3.5□□□□□ -1.85
PCNAP12004 AC133104.1-201ENST00000429100 218 ntBASIC3.5□□□□□ -1.85
PCNAP12004 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.5□□□□□ -1.85
PCNAP12004 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.5□□□□□ -1.85
PCNAP12004 MTCO2P11-201ENST00000431069 680 ntBASIC3.5□□□□□ -1.85
PCNAP12004 RPL23AP30-201ENST00000432419 501 ntBASIC3.5□□□□□ -1.85
PCNAP12004 FCF1P1-201ENST00000432690 571 ntBASIC3.5□□□□□ -1.85
PCNAP12004 MTCO3P45-201ENST00000443036 613 ntBASIC3.5□□□□□ -1.85
PCNAP12004 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.5□□□□□ -1.85
PCNAP12004 AC140076.1-201ENST00000449897 361 ntBASIC3.5□□□□□ -1.85
PCNAP12004 U3.44-201ENST00000458938 192 ntBASIC3.5□□□□□ -1.85
PCNAP12004 AL049714.1-201ENST00000466686 347 ntBASIC3.5□□□□□ -1.85
PCNAP12004 VN1R104P-201ENST00000505115 1009 ntBASIC3.5□□□□□ -1.85
PCNAP12004 HMGN1P11-201ENST00000508668 303 ntBASIC3.5□□□□□ -1.85
PCNAP12004 RNU6-390P-201ENST00000516259 103 ntBASIC3.5□□□□□ -1.85
PCNAP12004 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.5□□□□□ -1.85
PCNAP12004 RNU6-445P-201ENST00000516949 107 ntBASIC3.5□□□□□ -1.85
PCNAP12004 ERHP1-201ENST00000523006 310 ntBASIC3.5□□□□□ -1.85
PCNAP12004 FAM60DP-201ENST00000524174 632 ntBASIC3.5□□□□□ -1.85
PCNAP12004 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.5□□□□□ -1.85
PCNAP12004 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.5□□□□□ -1.85
PCNAP12004 AC087883.1-201ENST00000551882 391 ntBASIC3.5□□□□□ -1.85
PCNAP12004 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.5□□□□□ -1.85
PCNAP12004 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.5□□□□□ -1.85
PCNAP12004 AC006077.1-201ENST00000604746 343 ntBASIC3.5□□□□□ -1.85
PCNAP12004 AL158209.2-201ENST00000619266 216 ntBASIC3.5□□□□□ -1.85
PCNAP12004 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.5□□□□□ -1.85
PCNAP12004 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms