Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC099669.2-201ENST00000616549 437 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 SNHG22-203ENST00000617833 660 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 MIR6130-201ENST00000619419 109 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 RNA5SP196-201ENST00000625967 102 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AL592437.2-201ENST00000421655 2434 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AL139811.1-201ENST00000424779 2299 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 BTBD10P1-201ENST00000549824 1352 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AL049555.1-201ENST00000562834 1933 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 MFSD8-242ENST00000641690 4199 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-1155P-201ENST00000363554 107 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 RN7SKP224-201ENST00000364140 325 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 SNORD116-11-201ENST00000383882 92 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 SNORA24.1-201ENST00000384401 135 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-837P-201ENST00000391056 108 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 SDHCP2-201ENST00000398565 501 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AL445189.1-201ENST00000405722 338 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 RNA5SP317-201ENST00000410176 116 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-712P-201ENST00000410558 100 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 RNA5SP311-201ENST00000411290 116 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 MTATP6P29-201ENST00000415057 132 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AC093106.2-201ENST00000428212 385 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 RNA5SP315-201ENST00000516340 116 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 RNA5SP312-201ENST00000517068 116 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-699P-201ENST00000517081 110 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AC092747.3-201ENST00000603769 301 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AL034351.1-201ENST00000605288 668 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AP001486.3-201ENST00000615334 372 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AL355365.1-201ENST00000616480 294 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AC067931.1-201ENST00000624190 671 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 AL391684.1-202ENST00000641293 1636 ntBASIC6.07□□□□□ -1.44
CSB-PGBD3P0DP91 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-450P-201ENST00000364654 107 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 Y_RNA.389-201ENST00000383924 113 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 Y_RNA.473-201ENST00000384333 102 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 RNU1-13P-201ENST00000384499 162 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 AL360182.1-201ENST00000397433 468 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 AL356968.1-201ENST00000416622 474 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 ATG3P1-201ENST00000419507 911 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 RPL7P28-201ENST00000437739 740 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 MTCO3P45-201ENST00000443036 613 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 RN7SL432P-201ENST00000484057 298 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 AC020593.1-201ENST00000507399 299 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 RNY3P15-201ENST00000516297 97 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 DEFB109D-201ENST00000529497 240 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 ATP1B3P1-201ENST00000605365 821 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 AC243312.2-201ENST00000623340 601 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 AC005592.1-201ENST00000566527 1640 ntBASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC6.06□□□□□ -1.44
CSB-PGBD3P0DP91 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AP001029.2-203ENST00000589795 4910 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 SNORD115-7-201ENST00000365306 82 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms