Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC068790.3-201ENST00000602988 553 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AL355812.1-201ENST00000603215 216 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.69□□□□□ -1.82
MMP3P08254 AL133173.2-201ENST00000614270 90 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AL162274.2-201ENST00000614406 332 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AC072046.2-201ENST00000618366 268 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AC002550.2-201ENST00000621246 394 ntBASIC3.69□□□□□ -1.82
MMP3P08254 CR381572.1-201ENST00000625098 102 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AC009902.3-201ENST00000606235 2172 ntBASIC3.69□□□□□ -1.82
MMP3P08254 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.69□□□□□ -1.82
MMP3P08254 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.68□□□□□ -1.82
MMP3P08254 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MMP3P08254 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MMP3P08254 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
MMP3P08254 SNORD6-201ENST00000365444 73 ntBASIC3.68□□□□□ -1.82
MMP3P08254 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MMP3P08254 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.68□□□□□ -1.82
MMP3P08254 Y_RNA.554-201ENST00000384672 102 ntBASIC3.68□□□□□ -1.82
MMP3P08254 MRPL42P2-201ENST00000403169 426 ntBASIC3.68□□□□□ -1.82
MMP3P08254 AL583834.1-201ENST00000406943 343 ntBASIC3.68□□□□□ -1.82
MMP3P08254 RNU6-712P-201ENST00000410558 100 ntBASIC3.68□□□□□ -1.82
MMP3P08254 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.68□□□□□ -1.82
MMP3P08254 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.68□□□□□ -1.82
MMP3P08254 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.68□□□□□ -1.82
MMP3P08254 UBE2V1P13-201ENST00000436983 439 ntBASIC3.68□□□□□ -1.82
MMP3P08254 USP9YP15-201ENST00000442391 422 ntBASIC3.68□□□□□ -1.82
MMP3P08254 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.68□□□□□ -1.82
MMP3P08254 AC008264.1-201ENST00000447612 367 ntBASIC3.68□□□□□ -1.82
MMP3P08254 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.68□□□□□ -1.82
MMP3P08254 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.68□□□□□ -1.82
MMP3P08254 S100A11P2-201ENST00000467589 312 ntBASIC3.68□□□□□ -1.82
MMP3P08254 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.68□□□□□ -1.82
MMP3P08254 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.68□□□□□ -1.82
MMP3P08254 AC022483.1-201ENST00000514020 567 ntBASIC3.68□□□□□ -1.82
MMP3P08254 RNU4-60P-201ENST00000517239 135 ntBASIC3.68□□□□□ -1.82
MMP3P08254 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
MMP3P08254 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.68□□□□□ -1.82
MMP3P08254 AL360157.1-201ENST00000565962 87 ntBASIC3.68□□□□□ -1.82
MMP3P08254 TPRKBP2-201ENST00000565969 475 ntBASIC3.68□□□□□ -1.82
MMP3P08254 MIR3682-201ENST00000581338 84 ntBASIC3.68□□□□□ -1.82
MMP3P08254 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
MMP3P08254 AC011468.4-201ENST00000603942 409 ntBASIC3.68□□□□□ -1.82
MMP3P08254 AC007684.1-201ENST00000609671 477 ntBASIC3.68□□□□□ -1.82
MMP3P08254 AL161734.1-201ENST00000609720 557 ntBASIC3.68□□□□□ -1.82
MMP3P08254 AL590282.1-201ENST00000610379 1136 ntBASIC3.68□□□□□ -1.82
MMP3P08254 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
MMP3P08254 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
MMP3P08254 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
MMP3P08254 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
MMP3P08254 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MMP3P08254 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
MMP3P08254 RNU1-70P-201ENST00000362618 164 ntBASIC3.67□□□□□ -1.82
MMP3P08254 RNU4-1-201ENST00000363925 141 ntBASIC3.67□□□□□ -1.82
MMP3P08254 RNU6-282P-201ENST00000365357 103 ntBASIC3.67□□□□□ -1.82
MMP3P08254 RNU1-89P-201ENST00000384592 164 ntBASIC3.67□□□□□ -1.82
MMP3P08254 MIR19A-201ENST00000384878 82 ntBASIC3.67□□□□□ -1.82
MMP3P08254 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
MMP3P08254 AL138878.1-201ENST00000405131 347 ntBASIC3.67□□□□□ -1.82
MMP3P08254 RAD23BP2-201ENST00000416003 1207 ntBASIC3.67□□□□□ -1.82
MMP3P08254 MTND4LP10-201ENST00000435146 291 ntBASIC3.67□□□□□ -1.82
MMP3P08254 MTATP6P13-201ENST00000438531 667 ntBASIC3.67□□□□□ -1.82
MMP3P08254 SNORD121B-201ENST00000458838 81 ntBASIC3.67□□□□□ -1.82
MMP3P08254 snoU109.4-201ENST00000458953 143 ntBASIC3.67□□□□□ -1.82
MMP3P08254 SNORD108-201ENST00000459332 71 ntBASIC3.67□□□□□ -1.82
MMP3P08254 AC146507.1-201ENST00000468335 354 ntBASIC3.67□□□□□ -1.82
MMP3P08254 RPS3AP14-201ENST00000483907 780 ntBASIC3.67□□□□□ -1.82
MMP3P08254 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
MMP3P08254 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.67□□□□□ -1.82
MMP3P08254 AC108078.1-201ENST00000508073 725 ntBASIC3.67□□□□□ -1.82
MMP3P08254 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.67□□□□□ -1.82
MMP3P08254 RNU6-718P-201ENST00000516166 105 ntBASIC3.67□□□□□ -1.82
MMP3P08254 RN7SKP244-201ENST00000516513 307 ntBASIC3.67□□□□□ -1.82
MMP3P08254 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.67□□□□□ -1.82
MMP3P08254 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.67□□□□□ -1.82
MMP3P08254 EIF4BP1-201ENST00000554881 351 ntBASIC3.67□□□□□ -1.82
MMP3P08254 OR4T1P-201ENST00000554933 911 ntBASIC3.67□□□□□ -1.82
MMP3P08254 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.67□□□□□ -1.82
MMP3P08254 AL121576.1-201ENST00000556055 276 ntBASIC3.67□□□□□ -1.82
MMP3P08254 AP001094.1-201ENST00000579805 193 ntBASIC3.67□□□□□ -1.82
MMP3P08254 XIAPP1-201ENST00000603162 600 ntBASIC3.67□□□□□ -1.82
MMP3P08254 AC011451.2-201ENST00000604303 598 ntBASIC3.67□□□□□ -1.82
MMP3P08254 AL031176.1-201ENST00000604554 466 ntBASIC3.67□□□□□ -1.82
MMP3P08254 MIR98-201ENST00000606724 119 ntBASIC3.67□□□□□ -1.82
MMP3P08254 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.67□□□□□ -1.82
MMP3P08254 AC068944.2-201ENST00000610373 403 ntBASIC3.67□□□□□ -1.82
MMP3P08254 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.67□□□□□ -1.82
MMP3P08254 AC136475.10-201ENST00000620253 385 ntBASIC3.67□□□□□ -1.82
MMP3P08254 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.67□□□□□ -1.82
MMP3P08254 MIR6863-201ENST00000636112 90 ntBASIC3.67□□□□□ -1.82
MMP3P08254 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.67□□□□□ -1.82
MMP3P08254 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
MMP3P08254 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
MMP3P08254 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.67□□□□□ -1.82
MMP3P08254 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MMP3P08254 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MMP3P08254 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.66□□□□□ -1.82
MMP3P08254 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MMP3P08254 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.66□□□□□ -1.82
MMP3P08254 MTND5P3-201ENST00000438536 1800 ntBASIC3.66□□□□□ -1.82
MMP3P08254 Y_RNA.372-201ENST00000365599 102 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms