Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4□□□□□ -1.77
RHOP08100 AC244505.7-201ENST00000599675 272 ntBASIC4□□□□□ -1.77
RHOP08100 AP001429.1-201ENST00000602568 530 ntBASIC4□□□□□ -1.77
RHOP08100 U3.45-201ENST00000607547 219 ntBASIC4□□□□□ -1.77
RHOP08100 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4□□□□□ -1.77
RHOP08100 AL591424.2-201ENST00000617023 128 ntBASIC4□□□□□ -1.77
RHOP08100 AL354950.2-201ENST00000617939 290 ntBASIC4□□□□□ -1.77
RHOP08100 AL773545.4-201ENST00000637262 310 ntBASIC4□□□□□ -1.77
RHOP08100 AL513478.4-201ENST00000641636 310 ntBASIC4□□□□□ -1.77
RHOP08100 AC004972.1-201ENST00000623934 2209 ntBASIC4□□□□□ -1.77
RHOP08100 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RHOP08100 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4□□□□□ -1.77
RHOP08100 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4□□□□□ -1.77
RHOP08100 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4□□□□□ -1.77
RHOP08100 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RHOP08100 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHOP08100 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RHOP08100 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHOP08100 AL356489.2-201ENST00000566968 3528 ntBASIC3.99□□□□□ -1.77
RHOP08100 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RHOP08100 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHOP08100 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RHOP08100 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHOP08100 RNU6-989P-201ENST00000362756 107 ntBASIC3.99□□□□□ -1.77
RHOP08100 RN7SKP44-201ENST00000363602 316 ntBASIC3.99□□□□□ -1.77
RHOP08100 RNU6-1078P-201ENST00000364522 103 ntBASIC3.99□□□□□ -1.77
RHOP08100 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHOP08100 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RHOP08100 AL591416.1-201ENST00000404015 867 ntBASIC3.99□□□□□ -1.77
RHOP08100 PDCL2P1-201ENST00000419302 352 ntBASIC3.99□□□□□ -1.77
RHOP08100 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.99□□□□□ -1.77
RHOP08100 MTCO3P46-201ENST00000425787 232 ntBASIC3.99□□□□□ -1.77
RHOP08100 OR4K11P-201ENST00000431829 904 ntBASIC3.99□□□□□ -1.77
RHOP08100 HLA-N-201ENST00000437516 135 ntBASIC3.99□□□□□ -1.77
RHOP08100 RPL23AP33-201ENST00000442301 452 ntBASIC3.99□□□□□ -1.77
RHOP08100 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.99□□□□□ -1.77
RHOP08100 AC078785.3-201ENST00000476607 425 ntBASIC3.99□□□□□ -1.77
RHOP08100 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.99□□□□□ -1.77
RHOP08100 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.99□□□□□ -1.77
RHOP08100 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.99□□□□□ -1.77
RHOP08100 AP003385.6-201ENST00000531603 374 ntBASIC3.99□□□□□ -1.77
RHOP08100 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.99□□□□□ -1.77
RHOP08100 OR4K8P-201ENST00000578842 1048 ntBASIC3.99□□□□□ -1.77
RHOP08100 AL669831.4-202ENST00000590817 238 ntBASIC3.99□□□□□ -1.77
RHOP08100 AC010591.1-201ENST00000603941 649 ntBASIC3.99□□□□□ -1.77
RHOP08100 AC013553.2-201ENST00000604244 589 ntBASIC3.99□□□□□ -1.77
RHOP08100 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.99□□□□□ -1.77
RHOP08100 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.99□□□□□ -1.77
RHOP08100 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RHOP08100 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHOP08100 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.99□□□□□ -1.77
RHOP08100 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHOP08100 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHOP08100 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.99□□□□□ -1.77
RHOP08100 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RHOP08100 RPS4XP5-202ENST00000449995 1334 ntBASIC3.98□□□□□ -1.77
RHOP08100 MTCO1P24-201ENST00000515438 1558 ntBASIC3.98□□□□□ -1.77
RHOP08100 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RHOP08100 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RHOP08100 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.98□□□□□ -1.77
RHOP08100 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.98□□□□□ -1.77
RHOP08100 RNU4-73P-201ENST00000363164 141 ntBASIC3.98□□□□□ -1.77
RHOP08100 RNA5SP51-201ENST00000364750 119 ntBASIC3.98□□□□□ -1.77
RHOP08100 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RHOP08100 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RHOP08100 Y_RNA.529-201ENST00000384586 119 ntBASIC3.98□□□□□ -1.77
RHOP08100 MIR183-201ENST00000384958 110 ntBASIC3.98□□□□□ -1.77
RHOP08100 MIR34B-201ENST00000385076 84 ntBASIC3.98□□□□□ -1.77
RHOP08100 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RHOP08100 RPS20P15-201ENST00000412792 311 ntBASIC3.98□□□□□ -1.77
RHOP08100 AC007390.1-201ENST00000415722 356 ntBASIC3.98□□□□□ -1.77
RHOP08100 SDCBPP3-201ENST00000419629 891 ntBASIC3.98□□□□□ -1.77
RHOP08100 OR2AS1P-201ENST00000427827 319 ntBASIC3.98□□□□□ -1.77
RHOP08100 ATP5JP1-201ENST00000431631 322 ntBASIC3.98□□□□□ -1.77
RHOP08100 PRDX3P3-201ENST00000447765 522 ntBASIC3.98□□□□□ -1.77
RHOP08100 RPS26P28-201ENST00000470806 348 ntBASIC3.98□□□□□ -1.77
RHOP08100 RPS3AP50-201ENST00000487064 803 ntBASIC3.98□□□□□ -1.77
RHOP08100 AC068305.1-201ENST00000497406 726 ntBASIC3.98□□□□□ -1.77
RHOP08100 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.98□□□□□ -1.77
RHOP08100 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.98□□□□□ -1.77
RHOP08100 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.98□□□□□ -1.77
RHOP08100 AC114797.1-201ENST00000514003 728 ntBASIC3.98□□□□□ -1.77
RHOP08100 RN7SKP18-201ENST00000516005 275 ntBASIC3.98□□□□□ -1.77
RHOP08100 RNU2-10P-201ENST00000516375 211 ntBASIC3.98□□□□□ -1.77
RHOP08100 RNU6-798P-201ENST00000516912 103 ntBASIC3.98□□□□□ -1.77
RHOP08100 RNU4-60P-201ENST00000517239 135 ntBASIC3.98□□□□□ -1.77
RHOP08100 SUB1P1-201ENST00000524415 382 ntBASIC3.98□□□□□ -1.77
RHOP08100 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.98□□□□□ -1.77
RHOP08100 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.98□□□□□ -1.77
RHOP08100 RPS3AP23-202ENST00000574601 686 ntBASIC3.98□□□□□ -1.77
RHOP08100 MIR3922-201ENST00000585192 84 ntBASIC3.98□□□□□ -1.77
RHOP08100 AC010525.2-201ENST00000590920 195 ntBASIC3.98□□□□□ -1.77
RHOP08100 AL121992.2-201ENST00000606262 256 ntBASIC3.98□□□□□ -1.77
RHOP08100 AC130324.3-201ENST00000614165 542 ntBASIC3.98□□□□□ -1.77
RHOP08100 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.98□□□□□ -1.77
RHOP08100 AC007742.2-201ENST00000618226 398 ntBASIC3.98□□□□□ -1.77
RHOP08100 RMST_9.1-201ENST00000619945 193 ntBASIC3.98□□□□□ -1.77
RHOP08100 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.98□□□□□ -1.77
RHOP08100 AC006065.5-201ENST00000623427 349 ntBASIC3.98□□□□□ -1.77
RHOP08100 MTND1P37-201ENST00000636562 264 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms