Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.22□□□□□ -2.05
CD74P04233 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.22□□□□□ -2.05
CD74P04233 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.22□□□□□ -2.05
CD74P04233 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.22□□□□□ -2.05
CD74P04233 AC007954.1-201ENST00000554198 494 ntBASIC2.22□□□□□ -2.05
CD74P04233 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.22□□□□□ -2.05
CD74P04233 AC005498.1-201ENST00000592125 465 ntBASIC2.22□□□□□ -2.05
CD74P04233 AC006270.3-201ENST00000605967 1036 ntBASIC2.22□□□□□ -2.05
CD74P04233 AC106052.1-201ENST00000608029 497 ntBASIC2.22□□□□□ -2.05
CD74P04233 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.22□□□□□ -2.05
CD74P04233 AC009974.1-201ENST00000608881 455 ntBASIC2.22□□□□□ -2.05
CD74P04233 AL590099.1-201ENST00000615276 138 ntBASIC2.22□□□□□ -2.05
CD74P04233 AL449363.1-201ENST00000617815 186 ntBASIC2.22□□□□□ -2.05
CD74P04233 AC109809.1-201ENST00000619665 545 ntBASIC2.22□□□□□ -2.05
CD74P04233 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.22□□□□□ -2.05
CD74P04233 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.22□□□□□ -2.05
CD74P04233 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.22□□□□□ -2.05
CD74P04233 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CD74P04233 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.22□□□□□ -2.05
CD74P04233 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.22□□□□□ -2.05
CD74P04233 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CD74P04233 AL390862.1-201ENST00000635467 1469 ntBASIC2.21□□□□□ -2.06
CD74P04233 AC022336.2-201ENST00000568966 2538 ntBASIC2.21□□□□□ -2.06
CD74P04233 AL137003.2-201ENST00000606924 2538 ntBASIC2.21□□□□□ -2.06
CD74P04233 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CD74P04233 RNU6-343P-201ENST00000364709 104 ntBASIC2.21□□□□□ -2.06
CD74P04233 U8.8-201ENST00000365399 135 ntBASIC2.21□□□□□ -2.06
CD74P04233 RNU6-636P-201ENST00000384598 107 ntBASIC2.21□□□□□ -2.06
CD74P04233 RNU6-906P-201ENST00000384700 70 ntBASIC2.21□□□□□ -2.06
CD74P04233 MIR767-201ENST00000390228 109 ntBASIC2.21□□□□□ -2.06
CD74P04233 HMGB1P17-201ENST00000403495 628 ntBASIC2.21□□□□□ -2.06
CD74P04233 MIR1284-201ENST00000408337 120 ntBASIC2.21□□□□□ -2.06
CD74P04233 MTCO2P8-201ENST00000412213 658 ntBASIC2.21□□□□□ -2.06
CD74P04233 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.21□□□□□ -2.06
CD74P04233 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.21□□□□□ -2.06
CD74P04233 RPS25P9-201ENST00000435591 252 ntBASIC2.21□□□□□ -2.06
CD74P04233 AC011816.1-201ENST00000441346 546 ntBASIC2.21□□□□□ -2.06
CD74P04233 AC002381.1-201ENST00000447049 280 ntBASIC2.21□□□□□ -2.06
CD74P04233 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.21□□□□□ -2.06
CD74P04233 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.21□□□□□ -2.06
CD74P04233 DUXAP8-207ENST00000456786 622 ntBASIC2.21□□□□□ -2.06
CD74P04233 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.21□□□□□ -2.06
CD74P04233 SNORA59A-201ENST00000459326 152 ntBASIC2.21□□□□□ -2.06
CD74P04233 RNU7-23P-201ENST00000459465 62 ntBASIC2.21□□□□□ -2.06
CD74P04233 AL049714.1-201ENST00000466686 347 ntBASIC2.21□□□□□ -2.06
CD74P04233 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.21□□□□□ -2.06
CD74P04233 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.21□□□□□ -2.06
CD74P04233 RPS27P26-201ENST00000494583 239 ntBASIC2.21□□□□□ -2.06
CD74P04233 AC097462.2-201ENST00000504623 481 ntBASIC2.21□□□□□ -2.06
CD74P04233 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.21□□□□□ -2.06
CD74P04233 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.21□□□□□ -2.06
CD74P04233 RNU1-103P-201ENST00000516502 125 ntBASIC2.21□□□□□ -2.06
CD74P04233 RNU1-104P-201ENST00000517280 175 ntBASIC2.21□□□□□ -2.06
CD74P04233 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.21□□□□□ -2.06
CD74P04233 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.21□□□□□ -2.06
CD74P04233 DEFB131D-201ENST00000526803 184 ntBASIC2.21□□□□□ -2.06
CD74P04233 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CD74P04233 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CD74P04233 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.21□□□□□ -2.06
CD74P04233 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.21□□□□□ -2.06
CD74P04233 CYCSP2-201ENST00000558168 301 ntBASIC2.21□□□□□ -2.06
CD74P04233 H3F3AP1-201ENST00000559984 334 ntBASIC2.21□□□□□ -2.06
CD74P04233 AC099786.3-201ENST00000565735 1410 ntBASIC2.21□□□□□ -2.06
CD74P04233 AMZ2P1-203ENST00000565833 850 ntBASIC2.21□□□□□ -2.06
CD74P04233 AC090615.1-201ENST00000577519 154 ntBASIC2.21□□□□□ -2.06
CD74P04233 AC093732.2-201ENST00000607950 274 ntBASIC2.21□□□□□ -2.06
CD74P04233 AC092953.2-201ENST00000608000 699 ntBASIC2.21□□□□□ -2.06
CD74P04233 SCARNA15.3-201ENST00000626315 122 ntBASIC2.21□□□□□ -2.06
CD74P04233 SCARNA4.1-201ENST00000628597 123 ntBASIC2.21□□□□□ -2.06
CD74P04233 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CD74P04233 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.21□□□□□ -2.06
CD74P04233 Z82209.1-201ENST00000422141 2135 ntBASIC2.21□□□□□ -2.06
CD74P04233 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
CD74P04233 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CD74P04233 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CD74P04233 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CD74P04233 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CD74P04233 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
CD74P04233 AC009812.4-201ENST00000569134 1805 ntBASIC2.2□□□□□ -2.06
CD74P04233 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CD74P04233 RNU6-289P-201ENST00000364093 107 ntBASIC2.2□□□□□ -2.06
CD74P04233 SNORA67.1-201ENST00000364749 141 ntBASIC2.2□□□□□ -2.06
CD74P04233 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CD74P04233 U3.26-201ENST00000391236 204 ntBASIC2.2□□□□□ -2.06
CD74P04233 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.2□□□□□ -2.06
CD74P04233 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.2□□□□□ -2.06
CD74P04233 USP9YP33-201ENST00000412220 421 ntBASIC2.2□□□□□ -2.06
CD74P04233 AL592310.1-201ENST00000414330 671 ntBASIC2.2□□□□□ -2.06
CD74P04233 AC106883.1-201ENST00000418805 562 ntBASIC2.2□□□□□ -2.06
CD74P04233 BX119904.4-201ENST00000424402 301 ntBASIC2.2□□□□□ -2.06
CD74P04233 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.2□□□□□ -2.06
CD74P04233 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.2□□□□□ -2.06
CD74P04233 USP9YP35-201ENST00000435696 412 ntBASIC2.2□□□□□ -2.06
CD74P04233 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.2□□□□□ -2.06
CD74P04233 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.2□□□□□ -2.06
CD74P04233 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.2□□□□□ -2.06
CD74P04233 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.2□□□□□ -2.06
CD74P04233 snoU13.8-201ENST00000458890 104 ntBASIC2.2□□□□□ -2.06
CD74P04233 MEMO1P3-201ENST00000459811 302 ntBASIC2.2□□□□□ -2.06
CD74P04233 RPL31P41-201ENST00000477967 372 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms