Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.72□□□□□ -2.29
APOBP04114 RNU6-997P-201ENST00000384725 107 ntBASIC0.72□□□□□ -2.29
APOBP04114 RPL23AP47-201ENST00000408017 460 ntBASIC0.72□□□□□ -2.29
APOBP04114 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC0.72□□□□□ -2.29
APOBP04114 AL596276.1-201ENST00000434465 418 ntBASIC0.72□□□□□ -2.29
APOBP04114 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.72□□□□□ -2.29
APOBP04114 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC0.72□□□□□ -2.29
APOBP04114 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.72□□□□□ -2.29
APOBP04114 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.72□□□□□ -2.29
APOBP04114 MIR4512-201ENST00000583257 77 ntBASIC0.72□□□□□ -2.29
APOBP04114 AC113368.1-201ENST00000603736 382 ntBASIC0.72□□□□□ -2.29
APOBP04114 AL020996.3-201ENST00000606617 222 ntBASIC0.72□□□□□ -2.29
APOBP04114 AC008133.2-201ENST00000624540 351 ntBASIC0.72□□□□□ -2.29
APOBP04114 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
APOBP04114 MTND2P16-201ENST00000419987 799 ntBASIC0.72□□□□□ -2.29
APOBP04114 HMGN2P20-201ENST00000437531 273 ntBASIC0.72□□□□□ -2.29
APOBP04114 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.72□□□□□ -2.29
APOBP04114 SEM1P1-201ENST00000506694 209 ntBASIC0.72□□□□□ -2.29
APOBP04114 AC010625.1-201ENST00000511296 403 ntBASIC0.72□□□□□ -2.29
APOBP04114 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.72□□□□□ -2.29
APOBP04114 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.72□□□□□ -2.29
APOBP04114 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.72□□□□□ -2.29
APOBP04114 AC018630.2-202ENST00000422992 927 ntBASIC0.71□□□□□ -2.3
APOBP04114 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.71□□□□□ -2.3
APOBP04114 DPPA3P1-201ENST00000448050 469 ntBASIC0.71□□□□□ -2.3
APOBP04114 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.71□□□□□ -2.3
APOBP04114 RLIMP2-201ENST00000427891 1563 ntBASIC0.71□□□□□ -2.3
APOBP04114 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
APOBP04114 Y_RNA.274-201ENST00000364714 101 ntBASIC0.71□□□□□ -2.3
APOBP04114 MIR150-201ENST00000385048 84 ntBASIC0.71□□□□□ -2.3
APOBP04114 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
APOBP04114 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.71□□□□□ -2.3
APOBP04114 AC007560.1-201ENST00000426912 237 ntBASIC0.71□□□□□ -2.3
APOBP04114 AL136380.1-201ENST00000447970 162 ntBASIC0.71□□□□□ -2.3
APOBP04114 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
APOBP04114 AC018630.2-201ENST00000534866 2403 ntBASIC0.71□□□□□ -2.3
APOBP04114 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.71□□□□□ -2.3
APOBP04114 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
APOBP04114 AC006338.1-201ENST00000618453 749 ntBASIC0.71□□□□□ -2.3
APOBP04114 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.71□□□□□ -2.3
APOBP04114 DEFB108F-201ENST00000344638 222 ntBASIC0.71□□□□□ -2.3
APOBP04114 EBAG9P1-201ENST00000418955 543 ntBASIC0.71□□□□□ -2.3
APOBP04114 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.71□□□□□ -2.3
APOBP04114 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.71□□□□□ -2.3
APOBP04114 RPL7P31-201ENST00000450192 724 ntBASIC0.71□□□□□ -2.3
APOBP04114 RNU1-92P-201ENST00000517017 135 ntBASIC0.71□□□□□ -2.3
APOBP04114 OR5AQ1P-201ENST00000527596 927 ntBASIC0.71□□□□□ -2.3
APOBP04114 DUXAP5-201ENST00000529668 529 ntBASIC0.71□□□□□ -2.3
APOBP04114 MIR4458-201ENST00000578872 75 ntBASIC0.71□□□□□ -2.3
APOBP04114 MIR4295-201ENST00000585286 85 ntBASIC0.71□□□□□ -2.3
APOBP04114 GLUD1P4-201ENST00000590914 418 ntBASIC0.71□□□□□ -2.3
APOBP04114 AL445183.3-201ENST00000414168 502 ntBASIC0.71□□□□□ -2.3
APOBP04114 OR51A5P-201ENST00000415429 942 ntBASIC0.71□□□□□ -2.3
APOBP04114 AC009302.1-201ENST00000417147 390 ntBASIC0.71□□□□□ -2.3
APOBP04114 AP000949.1-201ENST00000438328 629 ntBASIC0.71□□□□□ -2.3
APOBP04114 AC000123.2-201ENST00000623124 461 ntBASIC0.71□□□□□ -2.3
APOBP04114 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.7□□□□□ -2.3
APOBP04114 RNU1-101P-201ENST00000391171 127 ntBASIC0.7□□□□□ -2.3
APOBP04114 RPL31P63-201ENST00000422565 375 ntBASIC0.7□□□□□ -2.3
APOBP04114 AL445305.1-201ENST00000432577 575 ntBASIC0.7□□□□□ -2.3
APOBP04114 DYNLL1P5-201ENST00000467158 270 ntBASIC0.7□□□□□ -2.3
APOBP04114 RPS15AP34-201ENST00000487776 387 ntBASIC0.7□□□□□ -2.3
APOBP04114 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.7□□□□□ -2.3
APOBP04114 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
APOBP04114 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
APOBP04114 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
APOBP04114 AL590233.1-201ENST00000430017 456 ntBASIC0.7□□□□□ -2.3
APOBP04114 CBX3P6-201ENST00000430257 527 ntBASIC0.7□□□□□ -2.3
APOBP04114 UBE2V2P1-201ENST00000434717 398 ntBASIC0.7□□□□□ -2.3
APOBP04114 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.7□□□□□ -2.3
APOBP04114 SNORD108-201ENST00000459332 71 ntBASIC0.7□□□□□ -2.3
APOBP04114 RPL21P93-201ENST00000480465 489 ntBASIC0.7□□□□□ -2.3
APOBP04114 AC233702.1-201ENST00000482905 502 ntBASIC0.7□□□□□ -2.3
APOBP04114 AC093591.1-201ENST00000491435 481 ntBASIC0.7□□□□□ -2.3
APOBP04114 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.7□□□□□ -2.3
APOBP04114 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
APOBP04114 MTCO1P30-201ENST00000515244 580 ntBASIC0.7□□□□□ -2.3
APOBP04114 RNA5SP337-201ENST00000517007 109 ntBASIC0.7□□□□□ -2.3
APOBP04114 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.7□□□□□ -2.3
APOBP04114 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
APOBP04114 AC090517.3-201ENST00000625170 141 ntBASIC0.7□□□□□ -2.3
APOBP04114 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.7□□□□□ -2.3
APOBP04114 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
APOBP04114 Z85994.2-201ENST00000434327 452 ntBASIC0.7□□□□□ -2.3
APOBP04114 LSM1P1-201ENST00000438629 273 ntBASIC0.7□□□□□ -2.3
APOBP04114 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.7□□□□□ -2.3
APOBP04114 AC239860.2-201ENST00000525886 270 ntBASIC0.7□□□□□ -2.3
APOBP04114 OR4R1P-201ENST00000529879 463 ntBASIC0.7□□□□□ -2.3
APOBP04114 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.7□□□□□ -2.3
APOBP04114 DNAJC8P1-201ENST00000554535 372 ntBASIC0.7□□□□□ -2.3
APOBP04114 ANP32BP3-201ENST00000559213 706 ntBASIC0.7□□□□□ -2.3
APOBP04114 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.7□□□□□ -2.3
APOBP04114 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
APOBP04114 ARL5AP3-201ENST00000439327 386 ntBASIC0.69□□□□□ -2.3
APOBP04114 KATNBL1P4-201ENST00000503545 918 ntBASIC0.69□□□□□ -2.3
APOBP04114 AC022447.3-201ENST00000506865 495 ntBASIC0.69□□□□□ -2.3
APOBP04114 OR4V1P-201ENST00000525394 1140 ntBASIC0.69□□□□□ -2.3
APOBP04114 AC091057.2-201ENST00000602594 792 ntBASIC0.69□□□□□ -2.3
APOBP04114 AC116618.1-201ENST00000634617 774 ntBASIC0.69□□□□□ -2.3
APOBP04114 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms