Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC006378.2-201ENST00000623178 2476 ntBASIC3.2□□□□□ -1.9
VTNP04004 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
VTNP04004 AC004972.1-201ENST00000623934 2209 ntBASIC3.2□□□□□ -1.9
VTNP04004 AC021755.1-201ENST00000559747 1447 ntBASIC3.2□□□□□ -1.9
VTNP04004 AC092125.1-201ENST00000562568 1995 ntBASIC3.2□□□□□ -1.9
VTNP04004 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
VTNP04004 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.2□□□□□ -1.9
VTNP04004 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VTNP04004 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VTNP04004 Y_RNA.318-201ENST00000365131 97 ntBASIC3.2□□□□□ -1.9
VTNP04004 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
VTNP04004 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VTNP04004 RNA5SP129-201ENST00000410276 118 ntBASIC3.2□□□□□ -1.9
VTNP04004 RNA5SP274-201ENST00000410484 108 ntBASIC3.2□□□□□ -1.9
VTNP04004 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.2□□□□□ -1.9
VTNP04004 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VTNP04004 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.2□□□□□ -1.9
VTNP04004 RPL21P40-201ENST00000428586 483 ntBASIC3.2□□□□□ -1.9
VTNP04004 AC105272.1-201ENST00000438604 198 ntBASIC3.2□□□□□ -1.9
VTNP04004 RPL22P17-201ENST00000438729 315 ntBASIC3.2□□□□□ -1.9
VTNP04004 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.2□□□□□ -1.9
VTNP04004 RPS24P13-201ENST00000442520 397 ntBASIC3.2□□□□□ -1.9
VTNP04004 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.2□□□□□ -1.9
VTNP04004 Z82190.1-201ENST00000454534 490 ntBASIC3.2□□□□□ -1.9
VTNP04004 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.2□□□□□ -1.9
VTNP04004 AC010424.1-201ENST00000506336 297 ntBASIC3.2□□□□□ -1.9
VTNP04004 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.2□□□□□ -1.9
VTNP04004 RNU6-1095P-201ENST00000516148 108 ntBASIC3.2□□□□□ -1.9
VTNP04004 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.2□□□□□ -1.9
VTNP04004 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.2□□□□□ -1.9
VTNP04004 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.2□□□□□ -1.9
VTNP04004 CR383656.7-201ENST00000548164 174 ntBASIC3.2□□□□□ -1.9
VTNP04004 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.2□□□□□ -1.9
VTNP04004 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.2□□□□□ -1.9
VTNP04004 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.2□□□□□ -1.9
VTNP04004 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.2□□□□□ -1.9
VTNP04004 AC012065.4-201ENST00000602445 679 ntBASIC3.2□□□□□ -1.9
VTNP04004 AC006023.1-201ENST00000603944 259 ntBASIC3.2□□□□□ -1.9
VTNP04004 BCRP9-201ENST00000605312 388 ntBASIC3.2□□□□□ -1.9
VTNP04004 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.2□□□□□ -1.9
VTNP04004 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.2□□□□□ -1.9
VTNP04004 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.2□□□□□ -1.9
VTNP04004 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.2□□□□□ -1.9
VTNP04004 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.19□□□□□ -1.9
VTNP04004 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VTNP04004 RNU6-50P-201ENST00000362356 103 ntBASIC3.19□□□□□ -1.9
VTNP04004 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
VTNP04004 U3.6-201ENST00000363622 211 ntBASIC3.19□□□□□ -1.9
VTNP04004 U3.11-201ENST00000364476 212 ntBASIC3.19□□□□□ -1.9
VTNP04004 SNORA9.2-201ENST00000365361 133 ntBASIC3.19□□□□□ -1.9
VTNP04004 RNU5E-5P-201ENST00000365379 116 ntBASIC3.19□□□□□ -1.9
VTNP04004 Y_RNA.436-201ENST00000384097 102 ntBASIC3.19□□□□□ -1.9
VTNP04004 RNU6-533P-201ENST00000384144 107 ntBASIC3.19□□□□□ -1.9
VTNP04004 RNU6-851P-201ENST00000384565 107 ntBASIC3.19□□□□□ -1.9
VTNP04004 Y_RNA.548-201ENST00000384656 105 ntBASIC3.19□□□□□ -1.9
VTNP04004 U3.42-201ENST00000408746 214 ntBASIC3.19□□□□□ -1.9
VTNP04004 AL359704.1-201ENST00000411586 781 ntBASIC3.19□□□□□ -1.9
VTNP04004 RPL17P12-201ENST00000413391 526 ntBASIC3.19□□□□□ -1.9
VTNP04004 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.19□□□□□ -1.9
VTNP04004 RPS20P5-201ENST00000434808 360 ntBASIC3.19□□□□□ -1.9
VTNP04004 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.19□□□□□ -1.9
VTNP04004 AC112653.1-201ENST00000443851 386 ntBASIC3.19□□□□□ -1.9
VTNP04004 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.19□□□□□ -1.9
VTNP04004 RNU6-956P-201ENST00000458868 103 ntBASIC3.19□□□□□ -1.9
VTNP04004 RNA5SP468-201ENST00000516782 93 ntBASIC3.19□□□□□ -1.9
VTNP04004 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VTNP04004 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.19□□□□□ -1.9
VTNP04004 SYF2P1-201ENST00000550658 413 ntBASIC3.19□□□□□ -1.9
VTNP04004 SETP7-201ENST00000552169 453 ntBASIC3.19□□□□□ -1.9
VTNP04004 AC034105.3-201ENST00000565294 442 ntBASIC3.19□□□□□ -1.9
VTNP04004 AC006362.1-201ENST00000567392 174 ntBASIC3.19□□□□□ -1.9
VTNP04004 MTCYBP33-201ENST00000575007 1130 ntBASIC3.19□□□□□ -1.9
VTNP04004 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.19□□□□□ -1.9
VTNP04004 OR4K8P-201ENST00000578842 1048 ntBASIC3.19□□□□□ -1.9
VTNP04004 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.19□□□□□ -1.9
VTNP04004 ELOCP29-201ENST00000588193 334 ntBASIC3.19□□□□□ -1.9
VTNP04004 AC011451.2-201ENST00000604303 598 ntBASIC3.19□□□□□ -1.9
VTNP04004 AL360181.4-201ENST00000621752 134 ntBASIC3.19□□□□□ -1.9
VTNP04004 MIR7153-201ENST00000637758 57 ntBASIC3.19□□□□□ -1.9
VTNP04004 MTND4P4-201ENST00000439033 1366 ntBASIC3.19□□□□□ -1.9
VTNP04004 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VTNP04004 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VTNP04004 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
VTNP04004 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VTNP04004 CCT4P2-201ENST00000233836 1548 ntBASIC3.19□□□□□ -1.9
VTNP04004 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VTNP04004 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
VTNP04004 AL035425.3-201ENST00000564206 4996 ntBASIC3.18□□□□□ -1.9
VTNP04004 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VTNP04004 AC092447.10-201ENST00000620607 1652 ntBASIC3.18□□□□□ -1.9
VTNP04004 DEFB109C-201ENST00000382575 264 ntBASIC3.18□□□□□ -1.9
VTNP04004 DEFB109B-201ENST00000382656 264 ntBASIC3.18□□□□□ -1.9
VTNP04004 RNU6-1074P-201ENST00000383995 104 ntBASIC3.18□□□□□ -1.9
VTNP04004 UBE2V1P2-201ENST00000397758 440 ntBASIC3.18□□□□□ -1.9
VTNP04004 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.18□□□□□ -1.9
VTNP04004 AL645937.1-202ENST00000421799 937 ntBASIC3.18□□□□□ -1.9
VTNP04004 UBE2V1P13-201ENST00000436983 439 ntBASIC3.18□□□□□ -1.9
VTNP04004 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.18□□□□□ -1.9
VTNP04004 AL590365.1-201ENST00000450788 243 ntBASIC3.18□□□□□ -1.9
VTNP04004 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms