Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.9□□□□□ -2.11
COL1A1P02452 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.9□□□□□ -2.11
COL1A1P02452 HSFY3P-201ENST00000444242 1191 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.9□□□□□ -2.11
COL1A1P02452 MTCO2P9-201ENST00000503214 694 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 KATNBL1P4-201ENST00000503545 918 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.9□□□□□ -2.11
COL1A1P02452 AC121758.2-201ENST00000553271 193 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 AL161670.1-201ENST00000554348 137 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.9□□□□□ -2.11
COL1A1P02452 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.9□□□□□ -2.11
COL1A1P02452 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.9□□□□□ -2.11
COL1A1P02452 AL078603.1-201ENST00000603824 313 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 BX649567.1-201ENST00000642071 1134 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 SGO1P2-201ENST00000429458 1589 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 AC006026.1-201ENST00000444025 1803 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 AC135776.4-201ENST00000624300 1904 ntBASIC1.9□□□□□ -2.11
COL1A1P02452 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COL1A1P02452 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COL1A1P02452 PRRC2CP1-201ENST00000404428 159 ntBASIC1.89□□□□□ -2.11
COL1A1P02452 ARPC3P1-201ENST00000437218 533 ntBASIC1.89□□□□□ -2.11
COL1A1P02452 MTCO3P17-201ENST00000443775 513 ntBASIC1.89□□□□□ -2.11
COL1A1P02452 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.89□□□□□ -2.11
COL1A1P02452 RPL21P134-201ENST00000453468 483 ntBASIC1.89□□□□□ -2.11
COL1A1P02452 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.89□□□□□ -2.11
COL1A1P02452 RPL37P25-201ENST00000507308 276 ntBASIC1.89□□□□□ -2.11
COL1A1P02452 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.89□□□□□ -2.11
COL1A1P02452 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.89□□□□□ -2.11
COL1A1P02452 AC015720.1-201ENST00000565251 277 ntBASIC1.89□□□□□ -2.11
COL1A1P02452 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.89□□□□□ -2.11
COL1A1P02452 MIR4421-201ENST00000578133 69 ntBASIC1.89□□□□□ -2.11
COL1A1P02452 MIR5194-201ENST00000582634 120 ntBASIC1.89□□□□□ -2.11
COL1A1P02452 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL1A1P02452 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL1A1P02452 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL1A1P02452 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.89□□□□□ -2.11
COL1A1P02452 MIR517C-201ENST00000385103 95 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 RNA5SP252-201ENST00000391131 119 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL1A1P02452 OFD1P18Y-201ENST00000420889 959 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.88□□□□□ -2.11
COL1A1P02452 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.88□□□□□ -2.11
COL1A1P02452 RNU1-123P-201ENST00000458950 160 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.88□□□□□ -2.11
COL1A1P02452 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.88□□□□□ -2.11
COL1A1P02452 AP001804.3-201ENST00000525146 880 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 NOP56P3-201ENST00000549457 385 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 AC087481.2-201ENST00000565492 330 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 AC098848.2-201ENST00000588023 330 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.88□□□□□ -2.11
COL1A1P02452 SEPT7P9-203ENST00000604116 343 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 AC068944.2-201ENST00000610373 403 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.88□□□□□ -2.11
COL1A1P02452 AC093536.2-201ENST00000565257 1406 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
COL1A1P02452 ZNF519P1-201ENST00000449011 1626 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 RNU1-42P-201ENST00000364033 160 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
COL1A1P02452 RPS4XP3-201ENST00000398541 413 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.88□□□□□ -2.11
COL1A1P02452 PAICSP7-201ENST00000419829 962 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 RPL7P37-201ENST00000425095 738 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.88□□□□□ -2.11
COL1A1P02452 HMGN1P8-201ENST00000463578 288 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL1A1P02452 ATP5EP1-201ENST00000510257 156 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 CDC42P4-201ENST00000510507 563 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 AC108157.1-201ENST00000510511 539 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 SNORA31.24-201ENST00000517232 57 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 OR4V1P-201ENST00000525394 1140 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.88□□□□□ -2.11
COL1A1P02452 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.88□□□□□ -2.11
COL1A1P02452 OR4K8P-201ENST00000578842 1048 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.88□□□□□ -2.11
COL1A1P02452 U73023.1-201ENST00000603134 700 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 AC135178.6-201ENST00000605314 398 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 AC095038.3-201ENST00000634439 195 ntBASIC1.88□□□□□ -2.11
COL1A1P02452 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.88□□□□□ -2.11
COL1A1P02452 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
COL1A1P02452 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL1A1P02452 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL1A1P02452 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.87□□□□□ -2.11
COL1A1P02452 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL1A1P02452 RNU6-263P-201ENST00000363811 107 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 SNORA67.6-201ENST00000391093 99 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 RNA5SP56-201ENST00000410277 118 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 AC092155.2-201ENST00000454675 477 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.87□□□□□ -2.11
COL1A1P02452 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.87□□□□□ -2.11
COL1A1P02452 RPS15AP36-201ENST00000492022 382 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.87□□□□□ -2.11
COL1A1P02452 MTCO1P47-201ENST00000523889 1271 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.87□□□□□ -2.11
COL1A1P02452 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.87□□□□□ -2.11
COL1A1P02452 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.87□□□□□ -2.11
COL1A1P02452 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.87□□□□□ -2.11
COL1A1P02452 AC023158.1-201ENST00000561632 1025 ntBASIC1.87□□□□□ -2.11
COL1A1P02452 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.87□□□□□ -2.11
COL1A1P02452 MIR4504-201ENST00000577413 92 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms