Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.35□□□□□ -2.03
SEMA3DO95025 SNORD116-12-201ENST00000384468 92 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 MIR518C-201ENST00000384822 101 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 MIR196B-201ENST00000384852 84 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AL031679.1-201ENST00000400616 525 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AL590084.1-201ENST00000407885 387 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 RNA5SP80-201ENST00000410475 111 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.35□□□□□ -2.03
SEMA3DO95025 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.35□□□□□ -2.03
SEMA3DO95025 SDCBPP1-201ENST00000440192 890 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AL831737.1-201ENST00000441288 271 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AC104389.3-201ENST00000445629 235 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AL049714.1-201ENST00000466686 347 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 RPL23AP45-201ENST00000476406 468 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AC004924.1-201ENST00000480160 781 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AC114981.1-201ENST00000503897 678 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AC096571.1-202ENST00000506634 735 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 SNORA31.18-201ENST00000517043 134 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.35□□□□□ -2.03
SEMA3DO95025 AC005832.3-201ENST00000537929 631 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.35□□□□□ -2.03
SEMA3DO95025 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SEMA3DO95025 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.35□□□□□ -2.03
SEMA3DO95025 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.35□□□□□ -2.03
SEMA3DO95025 AMZ2P1-203ENST00000565833 850 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 RPL23AP84-201ENST00000571193 464 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SEMA3DO95025 OR1M4P-201ENST00000589199 287 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 BNIP3P27-201ENST00000599991 412 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AL645944.1-201ENST00000603857 493 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 PART1_2.1-201ENST00000612397 250 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AC104763.3-201ENST00000613765 618 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AC004852.3-201ENST00000614131 326 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AL596245.1-201ENST00000618994 362 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AP003485.2-201ENST00000623636 610 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 OR1S1-201ENST00000624470 978 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AC099654.8-201ENST00000637757 681 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 AC013437.2-201ENST00000639587 677 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SEMA3DO95025 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SEMA3DO95025 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SEMA3DO95025 AL022578.1-201ENST00000439330 1433 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SEMA3DO95025 DEFB108F-201ENST00000344638 222 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 RNU6-343P-201ENST00000364709 104 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 U8.8-201ENST00000365399 135 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 RPL27AP8-201ENST00000424277 446 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SEMA3DO95025 AL139109.1-201ENST00000455491 297 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 RPS3P1-201ENST00000456781 192 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 RPL31P41-201ENST00000477967 372 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 RPL36AP51-201ENST00000487216 318 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AC147055.4-201ENST00000504399 745 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SEMA3DO95025 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.34□□□□□ -2.03
SEMA3DO95025 AL359273.1-201ENST00000510918 627 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 RNU6-798P-201ENST00000516912 103 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AC010376.1-201ENST00000522101 334 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 DEFB108D-201ENST00000527787 222 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.34□□□□□ -2.03
SEMA3DO95025 HMGB1P6-201ENST00000569046 646 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AC010546.1-201ENST00000569391 485 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AC011260.1-201ENST00000578420 472 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.34□□□□□ -2.03
SEMA3DO95025 AL590099.1-201ENST00000615276 138 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AC011330.2-201ENST00000621680 635 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 AC027309.3-201ENST00000623419 351 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.34□□□□□ -2.03
SEMA3DO95025 LINC02211-204ENST00000642024 1070 ntBASIC2.34□□□□□ -2.03
SEMA3DO95025 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SEMA3DO95025 AL356473.1-201ENST00000406203 1408 ntBASIC2.34□□□□□ -2.04
SEMA3DO95025 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SEMA3DO95025 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.33□□□□□ -2.04
SEMA3DO95025 AC008568.2-201ENST00000623862 2313 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
SEMA3DO95025 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SEMA3DO95025 RNU6-461P-201ENST00000364195 107 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 RNU6-1072P-201ENST00000384703 107 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 RNU6-443P-201ENST00000384780 107 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SEMA3DO95025 RNU6-952P-201ENST00000391164 108 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 RNU6-1197P-201ENST00000391183 107 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 AL513475.1-201ENST00000406602 315 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 TPMTP2-201ENST00000414372 726 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.33□□□□□ -2.04
SEMA3DO95025 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
SEMA3DO95025 MTCO2P5-201ENST00000422621 426 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.33□□□□□ -2.04
SEMA3DO95025 AC098826.1-201ENST00000433943 471 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 NANOGP2-201ENST00000435391 727 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.33□□□□□ -2.04
SEMA3DO95025 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.33□□□□□ -2.04
SEMA3DO95025 AC108938.1-201ENST00000451204 136 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.33□□□□□ -2.04
SEMA3DO95025 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.33□□□□□ -2.04
SEMA3DO95025 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.33□□□□□ -2.04
SEMA3DO95025 AC233279.1-201ENST00000455300 423 ntBASIC2.33□□□□□ -2.04
SEMA3DO95025 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms