Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.82□□□□□ -1.96
LCMT2O60294 AC092447.10-201ENST00000620607 1652 ntBASIC2.82□□□□□ -1.96
LCMT2O60294 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
LCMT2O60294 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
LCMT2O60294 AP003122.5-201ENST00000527668 3766 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LCMT2O60294 RNU6-853P-201ENST00000364306 107 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LCMT2O60294 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LCMT2O60294 RN7SKP266-201ENST00000410232 287 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 MTCO1P17-201ENST00000411522 491 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.81□□□□□ -1.96
LCMT2O60294 SAR1AP4-201ENST00000429225 591 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC022018.1-201ENST00000430685 241 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 UBE2D3P1-201ENST00000436669 444 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.81□□□□□ -1.96
LCMT2O60294 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.81□□□□□ -1.96
LCMT2O60294 ATG12P2-201ENST00000456830 416 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 snoU13.28-201ENST00000459235 104 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 HSPE1P6-201ENST00000479457 291 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AP001025.2-201ENST00000490908 477 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
LCMT2O60294 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.81□□□□□ -1.96
LCMT2O60294 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.81□□□□□ -1.96
LCMT2O60294 SNORA31.26-201ENST00000517250 137 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.81□□□□□ -1.96
LCMT2O60294 DUXAP5-201ENST00000529668 529 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC013828.2-201ENST00000532487 235 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.81□□□□□ -1.96
LCMT2O60294 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.81□□□□□ -1.96
LCMT2O60294 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.81□□□□□ -1.96
LCMT2O60294 ACTR3BP3-201ENST00000565577 979 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.81□□□□□ -1.96
LCMT2O60294 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.81□□□□□ -1.96
LCMT2O60294 MIR544B-201ENST00000582372 78 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 UBE2L4-201ENST00000587688 464 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.81□□□□□ -1.96
LCMT2O60294 AC011451.2-201ENST00000604303 598 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC018638.7-201ENST00000605836 1114 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AL161629.2-201ENST00000615347 275 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC008443.7-201ENST00000622195 246 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AL158801.5-201ENST00000623123 465 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC090617.7-201ENST00000623952 126 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC120349.3-201ENST00000624377 529 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC092192.1-201ENST00000633154 1018 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.81□□□□□ -1.96
LCMT2O60294 AC005832.2-201ENST00000538921 1430 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 ZNF833P-201ENST00000424938 1494 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.81□□□□□ -1.96
LCMT2O60294 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.81□□□□□ -1.96
LCMT2O60294 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
LCMT2O60294 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.81□□□□□ -1.96
LCMT2O60294 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LCMT2O60294 AC108206.1-201ENST00000570186 4159 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LCMT2O60294 RNU6-114P-201ENST00000384704 105 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.8□□□□□ -1.96
LCMT2O60294 AL139281.1-201ENST00000422120 335 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 RPL7P34-201ENST00000433316 712 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 SETP8-201ENST00000435341 628 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AC090774.1-201ENST00000435925 246 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LCMT2O60294 AC009237.8-201ENST00000445492 379 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.8□□□□□ -1.96
LCMT2O60294 RPS29P26-201ENST00000477483 171 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AC072039.1-201ENST00000477611 581 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 RPS29P2-201ENST00000479278 136 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AC011825.1-201ENST00000484967 388 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AL049874.1-201ENST00000489560 388 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.8□□□□□ -1.96
LCMT2O60294 MTND5P4-201ENST00000514978 288 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.8□□□□□ -1.96
LCMT2O60294 AC026801.2-201ENST00000515352 425 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 RNU6-928P-201ENST00000516876 104 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 RNU6-56P-201ENST00000516986 93 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 SNORA31.22-201ENST00000517204 135 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.8□□□□□ -1.96
LCMT2O60294 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LCMT2O60294 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
LCMT2O60294 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.8□□□□□ -1.96
LCMT2O60294 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.8□□□□□ -1.96
LCMT2O60294 AC022080.3-201ENST00000544433 482 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.8□□□□□ -1.96
LCMT2O60294 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.8□□□□□ -1.96
LCMT2O60294 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.8□□□□□ -1.96
LCMT2O60294 BNIP3P23-201ENST00000599655 511 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 U73023.1-201ENST00000603134 700 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AL158211.4-201ENST00000606988 584 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AC004067.1-201ENST00000608733 700 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 LRRC77P-213ENST00000637727 880 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 GABRG2-229ENST00000641017 3628 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AC000403.1-201ENST00000613696 3585 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 AL365361.1-201ENST00000566942 3481 ntBASIC2.8□□□□□ -1.96
LCMT2O60294 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
LCMT2O60294 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LCMT2O60294 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms