Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SNORA50A-202ENST00000629536 136 ntBASIC3.22□□□□□ -1.89
SSX4O60224 AC110994.2-201ENST00000635481 492 ntBASIC3.22□□□□□ -1.89
SSX4O60224 MIR7153-201ENST00000637758 57 ntBASIC3.22□□□□□ -1.89
SSX4O60224 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SSX4O60224 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SSX4O60224 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.22□□□□□ -1.89
SSX4O60224 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SSX4O60224 AC008568.2-201ENST00000623862 2313 ntBASIC3.21□□□□□ -1.89
SSX4O60224 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.21□□□□□ -1.9
SSX4O60224 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.21□□□□□ -1.9
SSX4O60224 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSX4O60224 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSX4O60224 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSX4O60224 RNA5SP72-201ENST00000364442 117 ntBASIC3.21□□□□□ -1.9
SSX4O60224 Y_RNA.359-201ENST00000365498 102 ntBASIC3.21□□□□□ -1.9
SSX4O60224 RNU6-348P-201ENST00000384386 107 ntBASIC3.21□□□□□ -1.9
SSX4O60224 MIR1290-201ENST00000408735 78 ntBASIC3.21□□□□□ -1.9
SSX4O60224 RNA5SP31-201ENST00000411144 127 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.21□□□□□ -1.9
SSX4O60224 USP12PX-201ENST00000432383 1057 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC119618.1-201ENST00000434191 222 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC093156.1-201ENST00000440382 670 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC244505.5-201ENST00000443639 207 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC016696.1-201ENST00000446949 318 ntBASIC3.21□□□□□ -1.9
SSX4O60224 GAPDHP27-201ENST00000447427 1020 ntBASIC3.21□□□□□ -1.9
SSX4O60224 PRDX3P3-201ENST00000447765 522 ntBASIC3.21□□□□□ -1.9
SSX4O60224 CYCSP35-201ENST00000451978 304 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC106707.2-201ENST00000484182 374 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC100870.1-201ENST00000522035 505 ntBASIC3.21□□□□□ -1.9
SSX4O60224 IGHV3-76-201ENST00000522465 295 ntBASIC3.21□□□□□ -1.9
SSX4O60224 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.21□□□□□ -1.9
SSX4O60224 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.21□□□□□ -1.9
SSX4O60224 MIR3611-201ENST00000584484 83 ntBASIC3.21□□□□□ -1.9
SSX4O60224 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.21□□□□□ -1.9
SSX4O60224 AC090578.1-201ENST00000604955 591 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC096577.2-201ENST00000611455 153 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.21□□□□□ -1.9
SSX4O60224 AC013476.2-201ENST00000614456 459 ntBASIC3.21□□□□□ -1.9
SSX4O60224 AC090132.2-201ENST00000615881 347 ntBASIC3.21□□□□□ -1.9
SSX4O60224 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.21□□□□□ -1.9
SSX4O60224 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SSX4O60224 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SSX4O60224 AC093908.1-201ENST00000623125 8092 ntBASIC3.21□□□□□ -1.9
SSX4O60224 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.21□□□□□ -1.9
SSX4O60224 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SSX4O60224 PWAR6-201ENST00000552334 4618 ntBASIC3.21□□□□□ -1.9
SSX4O60224 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SSX4O60224 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSX4O60224 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SSX4O60224 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX4O60224 AC002546.1-201ENST00000588041 2504 ntBASIC3.2□□□□□ -1.9
SSX4O60224 RNU1-75P-201ENST00000347264 129 ntBASIC3.2□□□□□ -1.9
SSX4O60224 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSX4O60224 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSX4O60224 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSX4O60224 SNORA48.8-201ENST00000391324 134 ntBASIC3.2□□□□□ -1.9
SSX4O60224 RPL23AP32-201ENST00000395315 459 ntBASIC3.2□□□□□ -1.9
SSX4O60224 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX4O60224 AL359634.1-202ENST00000404721 284 ntBASIC3.2□□□□□ -1.9
SSX4O60224 RN7SKP140-201ENST00000411196 284 ntBASIC3.2□□□□□ -1.9
SSX4O60224 RNU6-195P-201ENST00000411352 109 ntBASIC3.2□□□□□ -1.9
SSX4O60224 CDK8P2-201ENST00000415020 547 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX4O60224 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX4O60224 AC007283.2-201ENST00000424739 197 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.2□□□□□ -1.9
SSX4O60224 AC009961.2-201ENST00000435771 251 ntBASIC3.2□□□□□ -1.9
SSX4O60224 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX4O60224 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.2□□□□□ -1.9
SSX4O60224 RPS3AP46-201ENST00000448352 682 ntBASIC3.2□□□□□ -1.9
SSX4O60224 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.2□□□□□ -1.9
SSX4O60224 AC140076.1-201ENST00000449897 361 ntBASIC3.2□□□□□ -1.9
SSX4O60224 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX4O60224 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.2□□□□□ -1.9
SSX4O60224 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX4O60224 AL359385.1-201ENST00000456509 365 ntBASIC3.2□□□□□ -1.9
SSX4O60224 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX4O60224 RPS20P20-201ENST00000460498 340 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC084357.1-201ENST00000473404 255 ntBASIC3.2□□□□□ -1.9
SSX4O60224 RN7SL293P-201ENST00000481765 281 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX4O60224 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.2□□□□□ -1.9
SSX4O60224 AC074250.1-201ENST00000511117 192 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.2□□□□□ -1.9
SSX4O60224 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSX4O60224 SCARNA15.2-201ENST00000516409 127 ntBASIC3.2□□□□□ -1.9
SSX4O60224 SNORA18.6-201ENST00000516792 115 ntBASIC3.2□□□□□ -1.9
SSX4O60224 RNA5SP337-201ENST00000517007 109 ntBASIC3.2□□□□□ -1.9
SSX4O60224 SNORA70.24-201ENST00000517233 118 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC007991.1-201ENST00000522680 631 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AP002963.1-201ENST00000530590 184 ntBASIC3.2□□□□□ -1.9
SSX4O60224 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX4O60224 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX4O60224 RPL23AP84-201ENST00000571193 464 ntBASIC3.2□□□□□ -1.9
SSX4O60224 MTCYBP33-201ENST00000575007 1130 ntBASIC3.2□□□□□ -1.9
SSX4O60224 MIR4528-201ENST00000577763 90 ntBASIC3.2□□□□□ -1.9
SSX4O60224 MIR3682-201ENST00000581338 84 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms