Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RPS17P13-201ENST00000448974 407 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC104308.1-201ENST00000454621 333 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 RNU7-182P-201ENST00000459009 62 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 RPL21P11-201ENST00000461458 483 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AP001992.1-205ENST00000462248 379 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 RPL7L1P8-201ENST00000469911 741 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 HMGB3P15-201ENST00000507326 574 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.85□□□□□ -1.63
SRGAP3O43295 AC093853.1-201ENST00000515689 483 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 Y_RNA.682-201ENST00000516457 100 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.85□□□□□ -1.63
SRGAP3O43295 AC011979.2-201ENST00000527568 352 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.85□□□□□ -1.63
SRGAP3O43295 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.85□□□□□ -1.63
SRGAP3O43295 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.85□□□□□ -1.63
SRGAP3O43295 BNIP3P5-201ENST00000562290 498 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC100830.2-201ENST00000581636 240 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC245389.1-201ENST00000605141 529 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC124303.1-201ENST00000605703 360 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC019193.3-201ENST00000609144 554 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRGAP3O43295 AC244100.1-202ENST00000621554 382 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AL354798.1-201ENST00000622505 329 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 FP236240.3-201ENST00000623061 327 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.85□□□□□ -1.63
SRGAP3O43295 AL078596.1-201ENST00000624856 447 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.85□□□□□ -1.63
SRGAP3O43295 MTND5P1-201ENST00000445440 1375 ntBASIC4.85□□□□□ -1.63
SRGAP3O43295 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRGAP3O43295 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.85□□□□□ -1.63
SRGAP3O43295 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SRGAP3O43295 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.84□□□□□ -1.63
SRGAP3O43295 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRGAP3O43295 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRGAP3O43295 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
SRGAP3O43295 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.84□□□□□ -1.63
SRGAP3O43295 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRGAP3O43295 RN7SKP44-201ENST00000363602 316 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 RNU6-522P-201ENST00000364497 107 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 RNA5SP97-201ENST00000365006 84 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 SNORD82-201ENST00000365530 70 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 SNORA22B-201ENST00000383876 138 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 Y_RNA.414-201ENST00000384011 101 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 RNU6-1013P-201ENST00000384180 107 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 RNU6-574P-201ENST00000384265 107 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 RNU6-463P-201ENST00000384340 107 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 MIR558-201ENST00000384920 94 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 AL359634.1-202ENST00000404721 284 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 MTATP6P16-201ENST00000434543 526 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 AC108059.3-201ENST00000456388 214 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 RN7SL323P-201ENST00000494712 295 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 AC092436.1-201ENST00000506450 503 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.84□□□□□ -1.63
SRGAP3O43295 AC104057.1-201ENST00000515547 497 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 RNU6-1038P-201ENST00000516516 104 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SRGAP3O43295 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.84□□□□□ -1.63
SRGAP3O43295 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.84□□□□□ -1.63
SRGAP3O43295 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.84□□□□□ -1.63
SRGAP3O43295 SULT1C2P2-201ENST00000562517 294 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.84□□□□□ -1.63
SRGAP3O43295 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.84□□□□□ -1.63
SRGAP3O43295 AL022099.1-201ENST00000604551 712 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 CTHRC1P1-201ENST00000605383 469 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 AC023813.4-201ENST00000607580 580 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.84□□□□□ -1.63
SRGAP3O43295 AC245517.5-201ENST00000611529 162 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 AL596245.1-201ENST00000618994 362 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 7SK.10-201ENST00000621414 298 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 MIR4727-201ENST00000622232 55 ntBASIC4.84□□□□□ -1.63
SRGAP3O43295 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRGAP3O43295 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.84□□□□□ -1.63
SRGAP3O43295 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.84□□□□□ -1.63
SRGAP3O43295 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SRGAP3O43295 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SRGAP3O43295 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.83□□□□□ -1.64
SRGAP3O43295 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRGAP3O43295 Y_RNA.301-201ENST00000364990 103 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 Y_RNA.530-201ENST00000384587 101 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 RNU6-308P-201ENST00000390957 107 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 RNU6-903P-201ENST00000391270 109 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AL356057.3-201ENST00000402607 340 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 MIR548F5-201ENST00000408421 86 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 OR6C66P-201ENST00000414917 930 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AC113618.1-201ENST00000416747 285 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.83□□□□□ -1.64
SRGAP3O43295 RPL7L1P10-201ENST00000427790 463 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 PRPS1P1-201ENST00000445305 876 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 RAC1P7-201ENST00000445367 377 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AC107399.1-201ENST00000451226 265 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.83□□□□□ -1.64
SRGAP3O43295 AC091885.1-201ENST00000506658 268 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SRGAP3O43295 VWA8P1-201ENST00000510889 176 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 RNA5SP503-201ENST00000517047 117 ntBASIC4.83□□□□□ -1.64
SRGAP3O43295 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms