Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.95□□□□□ -1.78
PHGDHO43175 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.95□□□□□ -1.78
PHGDHO43175 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.95□□□□□ -1.78
PHGDHO43175 MTCO3P24-201ENST00000572729 782 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 MIR3138-201ENST00000585238 82 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.95□□□□□ -1.78
PHGDHO43175 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.95□□□□□ -1.78
PHGDHO43175 AL049634.3-201ENST00000604968 457 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 MIR6868-201ENST00000611215 58 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 MIR486-1-201ENST00000612171 68 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 MIR8059-201ENST00000620427 81 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.95□□□□□ -1.78
PHGDHO43175 AC011155.2-201ENST00000623202 216 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.95□□□□□ -1.78
PHGDHO43175 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PHGDHO43175 AC116096.1-201ENST00000566804 2314 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 UBE3AP2-201ENST00000429033 2259 ntBASIC3.95□□□□□ -1.78
PHGDHO43175 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PHGDHO43175 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.94□□□□□ -1.78
PHGDHO43175 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PHGDHO43175 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PHGDHO43175 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
PHGDHO43175 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PHGDHO43175 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
PHGDHO43175 RNU6-288P-201ENST00000363690 104 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 RNA5SP399-201ENST00000364003 117 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 SNORA56-201ENST00000383966 129 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 RNU6-190P-201ENST00000384154 102 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.94□□□□□ -1.78
PHGDHO43175 USP9YP6-201ENST00000413550 854 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.94□□□□□ -1.78
PHGDHO43175 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.94□□□□□ -1.78
PHGDHO43175 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.94□□□□□ -1.78
PHGDHO43175 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.94□□□□□ -1.78
PHGDHO43175 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.94□□□□□ -1.78
PHGDHO43175 RPL21P133-201ENST00000443666 476 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.94□□□□□ -1.78
PHGDHO43175 WASF1P1-201ENST00000447560 1131 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 DPPA3P1-201ENST00000448050 469 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.94□□□□□ -1.78
PHGDHO43175 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
PHGDHO43175 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.94□□□□□ -1.78
PHGDHO43175 AC116353.2-201ENST00000505332 712 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 PCBP2P3-201ENST00000509726 843 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 SNORA31.3-201ENST00000516029 96 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 RNU6-677P-201ENST00000516914 101 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 RNA5SP143-201ENST00000516936 115 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.94□□□□□ -1.78
PHGDHO43175 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.94□□□□□ -1.78
PHGDHO43175 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.94□□□□□ -1.78
PHGDHO43175 RN7SL600P-201ENST00000581811 299 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.94□□□□□ -1.78
PHGDHO43175 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PHGDHO43175 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.94□□□□□ -1.78
PHGDHO43175 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.94□□□□□ -1.78
PHGDHO43175 NRBF2P5-201ENST00000603087 788 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AL158032.1-201ENST00000605401 106 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.94□□□□□ -1.78
PHGDHO43175 AL365204.3-201ENST00000612448 685 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AC130324.3-201ENST00000614165 542 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PHGDHO43175 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PHGDHO43175 MAPK10-373ENST00000641983 6772 ntBASIC3.94□□□□□ -1.78
PHGDHO43175 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
PHGDHO43175 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHGDHO43175 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PHGDHO43175 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHGDHO43175 RNY3P3-201ENST00000363816 102 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 SNORD115-7-201ENST00000365306 82 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
PHGDHO43175 RNY3P14-201ENST00000384309 102 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 RNU6-14P-201ENST00000384630 106 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 Y_RNA.576-201ENST00000384781 102 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 SNORD37.1-201ENST00000390968 65 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 RNU6-817P-201ENST00000391083 104 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 AL138878.1-201ENST00000405131 347 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHGDHO43175 RPL18P10-201ENST00000425606 538 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 ATP5JP1-201ENST00000431631 322 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 HMGB1P37-201ENST00000439613 609 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 AC073415.1-201ENST00000449240 153 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 RNU6-953P-201ENST00000459154 107 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 RPL7L1P8-201ENST00000469911 741 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 RN7SL860P-201ENST00000473738 223 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 AC069439.1-201ENST00000494739 167 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 AC104806.1-201ENST00000508720 308 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.93□□□□□ -1.78
PHGDHO43175 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PHGDHO43175 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.93□□□□□ -1.78
PHGDHO43175 HIGD1AP5-201ENST00000529959 259 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 CYCSP29-201ENST00000533731 318 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.93□□□□□ -1.78
PHGDHO43175 CBX3P5-201ENST00000552017 521 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 MIR4703-201ENST00000577728 79 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.93□□□□□ -1.78
PHGDHO43175 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.93□□□□□ -1.78
PHGDHO43175 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.93□□□□□ -1.78
PHGDHO43175 AC007687.1-201ENST00000602704 304 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 AC020910.2-201ENST00000603635 610 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms