Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TO15178 RPS4XP3-201ENST00000398541 413 ntBASIC3.24□□□□□ -1.89
TO15178 AC110754.1-201ENST00000399740 601 ntBASIC3.24□□□□□ -1.89
TO15178 RNA5SP107-201ENST00000411358 122 ntBASIC3.24□□□□□ -1.89
TO15178 AC007899.1-201ENST00000412776 775 ntBASIC3.24□□□□□ -1.89
TO15178 CDK8P2-201ENST00000415020 547 ntBASIC3.24□□□□□ -1.89
TO15178 AC068533.1-201ENST00000418542 415 ntBASIC3.24□□□□□ -1.89
TO15178 DBIP2-201ENST00000419076 262 ntBASIC3.24□□□□□ -1.89
TO15178 AC018630.2-202ENST00000422992 927 ntBASIC3.24□□□□□ -1.89
TO15178 AC019097.1-201ENST00000424783 735 ntBASIC3.24□□□□□ -1.89
TO15178 AL589872.1-201ENST00000426602 288 ntBASIC3.24□□□□□ -1.89
TO15178 USP12PX-201ENST00000432383 1057 ntBASIC3.24□□□□□ -1.89
TO15178 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.24□□□□□ -1.89
TO15178 AC119618.1-201ENST00000434191 222 ntBASIC3.24□□□□□ -1.89
TO15178 AC005094.1-201ENST00000440420 368 ntBASIC3.24□□□□□ -1.89
TO15178 AL022238.1-201ENST00000442557 355 ntBASIC3.24□□□□□ -1.89
TO15178 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.24□□□□□ -1.89
TO15178 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.24□□□□□ -1.89
TO15178 SNORA84-201ENST00000459229 133 ntBASIC3.24□□□□□ -1.89
TO15178 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.24□□□□□ -1.89
TO15178 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.24□□□□□ -1.89
TO15178 AC079140.3-201ENST00000511111 550 ntBASIC3.24□□□□□ -1.89
TO15178 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TO15178 AC022447.1-201ENST00000515358 464 ntBASIC3.24□□□□□ -1.89
TO15178 SNORA70.16-201ENST00000516390 95 ntBASIC3.24□□□□□ -1.89
TO15178 RNU2-46P-201ENST00000517038 113 ntBASIC3.24□□□□□ -1.89
TO15178 AC100870.1-201ENST00000522035 505 ntBASIC3.24□□□□□ -1.89
TO15178 AP002963.1-201ENST00000530590 184 ntBASIC3.24□□□□□ -1.89
TO15178 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.24□□□□□ -1.89
TO15178 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.24□□□□□ -1.89
TO15178 AC123904.3-201ENST00000547218 814 ntBASIC3.24□□□□□ -1.89
TO15178 MIR3611-201ENST00000584484 83 ntBASIC3.24□□□□□ -1.89
TO15178 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.24□□□□□ -1.89
TO15178 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.24□□□□□ -1.89
TO15178 DUXAP4-201ENST00000603046 613 ntBASIC3.24□□□□□ -1.89
TO15178 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.24□□□□□ -1.89
TO15178 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.24□□□□□ -1.89
TO15178 AC091304.9-201ENST00000612091 226 ntBASIC3.24□□□□□ -1.89
TO15178 AC013476.2-201ENST00000614456 459 ntBASIC3.24□□□□□ -1.89
TO15178 AC138932.5-201ENST00000617759 563 ntBASIC3.24□□□□□ -1.89
TO15178 SNHG22-203ENST00000617833 660 ntBASIC3.24□□□□□ -1.89
TO15178 AC092656.1-203ENST00000624134 423 ntBASIC3.24□□□□□ -1.89
TO15178 PISRT1-201ENST00000626175 531 ntBASIC3.24□□□□□ -1.89
TO15178 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.24□□□□□ -1.89
TO15178 FARSBP1-201ENST00000435808 1778 ntBASIC3.24□□□□□ -1.89
TO15178 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TO15178 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.24□□□□□ -1.89
TO15178 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.24□□□□□ -1.89
TO15178 SRP72P2-201ENST00000344851 1979 ntBASIC3.23□□□□□ -1.89
TO15178 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TO15178 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TO15178 FRG1CP-201ENST00000358464 769 ntBASIC3.23□□□□□ -1.89
TO15178 RNY4P34-201ENST00000364779 95 ntBASIC3.23□□□□□ -1.89
TO15178 SNORA75-201ENST00000384158 137 ntBASIC3.23□□□□□ -1.89
TO15178 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TO15178 RNU6-248P-201ENST00000410720 107 ntBASIC3.23□□□□□ -1.89
TO15178 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.23□□□□□ -1.89
TO15178 RPS15AP12-201ENST00000419498 388 ntBASIC3.23□□□□□ -1.89
TO15178 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.23□□□□□ -1.89
TO15178 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TO15178 TMEM167AP1-201ENST00000423409 219 ntBASIC3.23□□□□□ -1.89
TO15178 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.23□□□□□ -1.89
TO15178 AC137499.1-201ENST00000427602 88 ntBASIC3.23□□□□□ -1.89
TO15178 AL356867.1-201ENST00000429623 299 ntBASIC3.23□□□□□ -1.89
TO15178 AC091286.1-201ENST00000431233 461 ntBASIC3.23□□□□□ -1.89
TO15178 ATP5JP1-201ENST00000431631 322 ntBASIC3.23□□□□□ -1.89
TO15178 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.23□□□□□ -1.89
TO15178 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.23□□□□□ -1.89
TO15178 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.23□□□□□ -1.89
TO15178 AC244505.5-201ENST00000443639 207 ntBASIC3.23□□□□□ -1.89
TO15178 RPS29P31-201ENST00000446147 164 ntBASIC3.23□□□□□ -1.89
TO15178 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.23□□□□□ -1.89
TO15178 MTND2P24-201ENST00000453434 806 ntBASIC3.23□□□□□ -1.89
TO15178 MTCO2P29-201ENST00000465212 189 ntBASIC3.23□□□□□ -1.89
TO15178 RAP1BP2-201ENST00000478270 544 ntBASIC3.23□□□□□ -1.89
TO15178 AC010587.1-201ENST00000505809 469 ntBASIC3.23□□□□□ -1.89
TO15178 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.23□□□□□ -1.89
TO15178 AC110768.1-201ENST00000509222 400 ntBASIC3.23□□□□□ -1.89
TO15178 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.23□□□□□ -1.89
TO15178 MTND3P5-201ENST00000512798 333 ntBASIC3.23□□□□□ -1.89
TO15178 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.23□□□□□ -1.89
TO15178 RNU6-64P-201ENST00000517119 105 ntBASIC3.23□□□□□ -1.89
TO15178 FAM60DP-201ENST00000524174 632 ntBASIC3.23□□□□□ -1.89
TO15178 OR5B10P-201ENST00000532869 642 ntBASIC3.23□□□□□ -1.89
TO15178 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.23□□□□□ -1.89
TO15178 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.23□□□□□ -1.89
TO15178 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.23□□□□□ -1.89
TO15178 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.23□□□□□ -1.89
TO15178 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.23□□□□□ -1.89
TO15178 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TO15178 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.23□□□□□ -1.89
TO15178 AL606834.2-201ENST00000602954 668 ntBASIC3.23□□□□□ -1.89
TO15178 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.23□□□□□ -1.89
TO15178 AC090578.1-201ENST00000604955 591 ntBASIC3.23□□□□□ -1.89
TO15178 AC109347.2-201ENST00000610220 349 ntBASIC3.23□□□□□ -1.89
TO15178 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.23□□□□□ -1.89
TO15178 SDR42E1P2-201ENST00000614861 481 ntBASIC3.23□□□□□ -1.89
TO15178 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.23□□□□□ -1.89
TO15178 AC009509.4-201ENST00000619202 509 ntBASIC3.23□□□□□ -1.89
TO15178 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms