Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.11□□□□□ -2.07
CHD1O14646 TRBV8-1-201ENST00000481590 279 ntBASIC2.11□□□□□ -2.07
CHD1O14646 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.11□□□□□ -2.07
CHD1O14646 AP003033.1-201ENST00000527244 415 ntBASIC2.11□□□□□ -2.07
CHD1O14646 AC096586.2-201ENST00000610260 441 ntBASIC2.11□□□□□ -2.07
CHD1O14646 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.11□□□□□ -2.07
CHD1O14646 AC022079.2-201ENST00000619739 566 ntBASIC2.11□□□□□ -2.07
CHD1O14646 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CHD1O14646 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CHD1O14646 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CHD1O14646 AC103710.2-202ENST00000641454 2853 ntBASIC2.11□□□□□ -2.07
CHD1O14646 AC096533.1-201ENST00000411645 353 ntBASIC2.11□□□□□ -2.07
CHD1O14646 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.11□□□□□ -2.07
CHD1O14646 AL512661.1-201ENST00000434586 1253 ntBASIC2.11□□□□□ -2.07
CHD1O14646 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.11□□□□□ -2.07
CHD1O14646 AL583843.1-201ENST00000456070 346 ntBASIC2.11□□□□□ -2.07
CHD1O14646 MRPL42P6-201ENST00000486397 371 ntBASIC2.11□□□□□ -2.07
CHD1O14646 OR5AQ1P-201ENST00000527596 927 ntBASIC2.11□□□□□ -2.07
CHD1O14646 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.11□□□□□ -2.07
CHD1O14646 CENPUP2-201ENST00000555897 1186 ntBASIC2.11□□□□□ -2.07
CHD1O14646 AC008083.4-201ENST00000615076 444 ntBASIC2.11□□□□□ -2.07
CHD1O14646 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.11□□□□□ -2.07
CHD1O14646 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
CHD1O14646 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHD1O14646 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC2.1□□□□□ -2.07
CHD1O14646 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.1□□□□□ -2.07
CHD1O14646 HSPE1P3-201ENST00000559254 309 ntBASIC2.1□□□□□ -2.07
CHD1O14646 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.1□□□□□ -2.07
CHD1O14646 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CHD1O14646 AL034374.1-201ENST00000406329 351 ntBASIC2.09□□□□□ -2.07
CHD1O14646 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CHD1O14646 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.09□□□□□ -2.07
CHD1O14646 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
CHD1O14646 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.09□□□□□ -2.07
CHD1O14646 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.09□□□□□ -2.07
CHD1O14646 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.09□□□□□ -2.07
CHD1O14646 AC113155.1-201ENST00000511141 769 ntBASIC2.09□□□□□ -2.07
CHD1O14646 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.09□□□□□ -2.07
CHD1O14646 NBEAP1-201ENST00000554452 979 ntBASIC2.09□□□□□ -2.07
CHD1O14646 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.09□□□□□ -2.07
CHD1O14646 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CHD1O14646 Z82195.2-201ENST00000612348 18351 ntBASIC2.09□□□□□ -2.08
CHD1O14646 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.09□□□□□ -2.08
CHD1O14646 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CHD1O14646 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
CHD1O14646 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
CHD1O14646 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.08□□□□□ -2.08
CHD1O14646 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.08□□□□□ -2.08
CHD1O14646 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.08□□□□□ -2.08
CHD1O14646 AC112503.2-201ENST00000609005 552 ntBASIC2.08□□□□□ -2.08
CHD1O14646 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CHD1O14646 SNORA18.2-201ENST00000383865 132 ntBASIC2.08□□□□□ -2.08
CHD1O14646 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.08□□□□□ -2.08
CHD1O14646 RNU6-1077P-201ENST00000410506 102 ntBASIC2.08□□□□□ -2.08
CHD1O14646 PGBD4P3-201ENST00000440731 581 ntBASIC2.08□□□□□ -2.08
CHD1O14646 HMGB3P3-201ENST00000510526 400 ntBASIC2.08□□□□□ -2.08
CHD1O14646 OR4V1P-201ENST00000525394 1140 ntBASIC2.08□□□□□ -2.08
CHD1O14646 AC006065.5-201ENST00000623427 349 ntBASIC2.08□□□□□ -2.08
CHD1O14646 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.08□□□□□ -2.08
CHD1O14646 SNORA7.2-201ENST00000364446 145 ntBASIC2.07□□□□□ -2.08
CHD1O14646 AL445669.1-201ENST00000426743 755 ntBASIC2.07□□□□□ -2.08
CHD1O14646 AC069277.2-201ENST00000454211 432 ntBASIC2.07□□□□□ -2.08
CHD1O14646 AC008427.1-201ENST00000503102 655 ntBASIC2.07□□□□□ -2.08
CHD1O14646 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.07□□□□□ -2.08
CHD1O14646 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.07□□□□□ -2.08
CHD1O14646 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.07□□□□□ -2.08
CHD1O14646 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.07□□□□□ -2.08
CHD1O14646 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.07□□□□□ -2.08
CHD1O14646 AC016769.3-201ENST00000396562 315 ntBASIC2.06□□□□□ -2.08
CHD1O14646 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
CHD1O14646 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.06□□□□□ -2.08
CHD1O14646 OR10R1P-201ENST00000441524 1141 ntBASIC2.06□□□□□ -2.08
CHD1O14646 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.06□□□□□ -2.08
CHD1O14646 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.06□□□□□ -2.08
CHD1O14646 AC023825.1-201ENST00000566704 1030 ntBASIC2.06□□□□□ -2.08
CHD1O14646 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
CHD1O14646 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHD1O14646 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHD1O14646 SNORA14A-201ENST00000364773 135 ntBASIC2.05□□□□□ -2.08
CHD1O14646 MIR627-201ENST00000384979 97 ntBASIC2.05□□□□□ -2.08
CHD1O14646 MIR320A-201ENST00000385302 82 ntBASIC2.05□□□□□ -2.08
CHD1O14646 AL445183.3-201ENST00000414168 502 ntBASIC2.05□□□□□ -2.08
CHD1O14646 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.05□□□□□ -2.08
CHD1O14646 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.05□□□□□ -2.08
CHD1O14646 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.05□□□□□ -2.08
CHD1O14646 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.05□□□□□ -2.08
CHD1O14646 NF1P3-201ENST00000457709 450 ntBASIC2.05□□□□□ -2.08
CHD1O14646 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
CHD1O14646 MTCO1P47-201ENST00000523889 1271 ntBASIC2.05□□□□□ -2.08
CHD1O14646 AC009127.3-201ENST00000570531 403 ntBASIC2.05□□□□□ -2.08
CHD1O14646 CBX3P2-202ENST00000583365 535 ntBASIC2.05□□□□□ -2.08
CHD1O14646 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.05□□□□□ -2.08
CHD1O14646 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.05□□□□□ -2.08
CHD1O14646 AC005534.2-201ENST00000431047 433 ntBASIC2.05□□□□□ -2.08
CHD1O14646 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.05□□□□□ -2.08
CHD1O14646 THAP5P1-201ENST00000439089 262 ntBASIC2.05□□□□□ -2.08
CHD1O14646 TPRKBP1-201ENST00000456243 481 ntBASIC2.05□□□□□ -2.08
CHD1O14646 AC108059.3-201ENST00000456388 214 ntBASIC2.05□□□□□ -2.08
CHD1O14646 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.05□□□□□ -2.08
CHD1O14646 AC087343.1-201ENST00000477341 475 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms