Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
EIF3FO00303 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
EIF3FO00303 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
EIF3FO00303 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.66□□□□□ -1.82
EIF3FO00303 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
EIF3FO00303 RNU6-701P-201ENST00000384059 107 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AL445189.1-201ENST00000405722 338 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.65□□□□□ -1.83
EIF3FO00303 AC007899.1-201ENST00000412776 775 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 CDK8P2-201ENST00000415020 547 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AC012498.1-201ENST00000424037 437 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.65□□□□□ -1.83
EIF3FO00303 AC007283.2-201ENST00000424739 197 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 OR2AS1P-201ENST00000427827 319 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.65□□□□□ -1.83
EIF3FO00303 AC104850.1-201ENST00000435940 476 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 RPS24P1-201ENST00000438550 371 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 HMGB3P12-201ENST00000438745 556 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.65□□□□□ -1.83
EIF3FO00303 SNRPGP6-201ENST00000451124 220 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 RPL7P5-201ENST00000471472 736 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 KC877373.1-201ENST00000479066 408 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.65□□□□□ -1.83
EIF3FO00303 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.65□□□□□ -1.83
EIF3FO00303 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.65□□□□□ -1.83
EIF3FO00303 AC079140.3-201ENST00000511111 550 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AC022447.1-201ENST00000515358 464 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 SNORD59.2-201ENST00000516873 68 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AP006587.4-201ENST00000526053 529 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.65□□□□□ -1.83
EIF3FO00303 RPL21P12-201ENST00000559810 515 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.65□□□□□ -1.83
EIF3FO00303 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.65□□□□□ -1.83
EIF3FO00303 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.65□□□□□ -1.83
EIF3FO00303 KLKP1-201ENST00000595979 403 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 DPPA3P3-201ENST00000603842 430 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 RNU1-30P-201ENST00000606575 163 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AP002360.4-201ENST00000606980 481 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AC138932.5-201ENST00000617759 563 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 AC009509.4-201ENST00000619202 509 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.65□□□□□ -1.83
EIF3FO00303 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
EIF3FO00303 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.65□□□□□ -1.83
EIF3FO00303 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
EIF3FO00303 CR848007.1-201ENST00000442354 1699 ntBASIC3.65□□□□□ -1.83
EIF3FO00303 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EIF3FO00303 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EIF3FO00303 AC073343.1-201ENST00000328239 651 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.64□□□□□ -1.83
EIF3FO00303 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EIF3FO00303 RNU6-348P-201ENST00000384386 107 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 RNU6-1035P-201ENST00000384477 107 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 MIR30B-201ENST00000384850 88 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
EIF3FO00303 RNU6-817P-201ENST00000391083 104 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 HMGB3P20-201ENST00000417997 600 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 AC006989.1-201ENST00000427212 131 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 ISCA1P6-201ENST00000427740 390 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 AL353706.1-201ENST00000436728 494 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 HIGD1AP11-201ENST00000438361 280 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 NEFMP1-201ENST00000443423 1006 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
EIF3FO00303 AC006483.1-201ENST00000487308 313 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 AC092185.1-201ENST00000491371 97 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 PCBP2P3-201ENST00000509726 843 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.64□□□□□ -1.83
EIF3FO00303 RNU6-579P-201ENST00000516879 102 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 AC022616.3-201ENST00000523940 148 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.64□□□□□ -1.83
EIF3FO00303 AC008011.1-201ENST00000545989 227 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 AC087883.1-201ENST00000551882 391 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.64□□□□□ -1.83
EIF3FO00303 AC067852.3-201ENST00000589177 561 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 AL161734.1-201ENST00000609720 557 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 AC100793.4-201ENST00000613683 429 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 AC007998.5-201ENST00000622938 237 ntBASIC3.64□□□□□ -1.83
EIF3FO00303 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EIF3FO00303 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
EIF3FO00303 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.64□□□□□ -1.83
EIF3FO00303 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
EIF3FO00303 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
EIF3FO00303 AC233263.6-201ENST00000631132 1963 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.63□□□□□ -1.83
EIF3FO00303 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
EIF3FO00303 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.63□□□□□ -1.83
EIF3FO00303 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 RNU1-64P-201ENST00000365443 163 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 BTF3L4P1-201ENST00000413813 468 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 AC017079.2-201ENST00000416102 485 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 MTND3P17-201ENST00000416968 344 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 AL139247.1-201ENST00000422768 325 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.63□□□□□ -1.83
EIF3FO00303 DPPA2P1-201ENST00000428060 556 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 RPL36AP6-201ENST00000435770 321 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.63□□□□□ -1.83
EIF3FO00303 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.63□□□□□ -1.83
EIF3FO00303 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.63□□□□□ -1.83
EIF3FO00303 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
EIF3FO00303 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms