Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 RPL37P4-201ENST00000448908 268 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 CECR9-201ENST00000453421 199 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC008571.1-201ENST00000467232 300 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC090096.1-201ENST00000489168 390 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC104090.1-201ENST00000506341 1171 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC002456.2-201ENST00000509356 380 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 LTV1P1-201ENST00000510683 1237 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 MTCYBP43-201ENST00000513621 740 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC100870.1-201ENST00000522035 505 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 MTCO2P15-201ENST00000532655 656 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC015871.2-201ENST00000603605 948 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AP000787.2-201ENST00000604432 568 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC007349.4-201ENST00000608114 532 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC005046.1-201ENST00000608515 625 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.1□□□□□ -2.07
SMKR1H3BMG3 ELF2P3-201ENST00000445099 1506 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC010889.1-201ENST00000566193 2666 ntBASIC2.1□□□□□ -2.07
SMKR1H3BMG3 AC004520.1-201ENST00000608362 1413 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AL359693.1-201ENST00000614959 2407 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 RNU1-73P-201ENST00000383971 164 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 RNU6-1242P-201ENST00000391052 103 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 HMGN2P35-201ENST00000412164 270 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 RAB9AP3-201ENST00000412737 573 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 RPS29P4-201ENST00000414733 161 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 NANOGP5-201ENST00000424456 877 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 COX6CP12-201ENST00000446748 202 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 RAB9AP1-201ENST00000449393 573 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC106872.3-201ENST00000495104 446 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 MTND4LP31-201ENST00000514859 294 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 RN7SKP258-201ENST00000517151 304 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC109329.2-201ENST00000519658 482 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 UBTFL10-201ENST00000528532 562 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC011611.1-201ENST00000552179 197 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC023824.2-201ENST00000566185 400 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC007151.1-201ENST00000572774 483 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 CKS1BP3-201ENST00000600888 237 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 VN1R82P-201ENST00000601481 356 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AL391001.1-201ENST00000602747 715 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC005014.3-201ENST00000605985 190 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC090115.4-201ENST00000609970 188 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AL355365.1-201ENST00000616480 294 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC138932.5-201ENST00000617759 563 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC010338.1-201ENST00000621823 717 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC091953.5-201ENST00000622919 233 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC018692.3-201ENST00000623929 123 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC079416.3-201ENST00000624479 549 ntBASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.09□□□□□ -2.07
SMKR1H3BMG3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.09□□□□□ -2.08
SMKR1H3BMG3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.09□□□□□ -2.08
SMKR1H3BMG3 AC006378.2-201ENST00000623178 2476 ntBASIC2.09□□□□□ -2.08
SMKR1H3BMG3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SMKR1H3BMG3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.09□□□□□ -2.08
SMKR1H3BMG3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
SMKR1H3BMG3 RNU6-723P-201ENST00000383973 107 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms