Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RNU1-128P-201ENST00000516704 160 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 RN7SKP258-201ENST00000517151 304 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 PAICSP4-201ENST00000517543 1253 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 CASP1P1-201ENST00000526345 212 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC128657.1-201ENST00000549459 145 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC012213.3-201ENST00000577199 777 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 OR5H6-203ENST00000642105 978 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 MAPK10-362ENST00000641864 4484 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SRRM4A7MD48 AL513302.2-201ENST00000562313 1842 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 ZNF285B-201ENST00000561698 1767 ntBASIC2.79□□□□□ -1.96
SRRM4A7MD48 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SRRM4A7MD48 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SRRM4A7MD48 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.79□□□□□ -1.96
SRRM4A7MD48 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 RNA5SP124-201ENST00000362739 110 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 RNU4-21P-201ENST00000362802 126 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 U3.11-201ENST00000364476 212 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 RNU6-1035P-201ENST00000384477 107 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 RNY3P10-201ENST00000384764 102 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 CYCSP19-201ENST00000411715 316 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 RAB9AP3-201ENST00000412737 573 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 Z85995.1-201ENST00000415547 335 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 SYF2P2-201ENST00000417620 583 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 USP9YP13-201ENST00000417797 480 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 ZNF90P2-204ENST00000419323 1075 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 CYCSP46-201ENST00000423569 204 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 AC019097.1-201ENST00000424783 735 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 AL356583.2-201ENST00000426536 280 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 RPL23AP69-201ENST00000431134 458 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 AC119618.1-201ENST00000434191 222 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 HIGD1AP11-201ENST00000438361 280 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 RAB9AP1-201ENST00000449393 573 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 SNORD105B-201ENST00000458770 79 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 AC010424.1-201ENST00000506336 297 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 RN7SKP18-201ENST00000516005 275 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 Y_RNA.695-201ENST00000516715 107 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 RPS3AP4-201ENST00000555161 764 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 SNORA51-201ENST00000606420 132 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 MIR7153-201ENST00000637758 57 ntBASIC2.78□□□□□ -1.96
SRRM4A7MD48 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.78□□□□□ -1.96
SRRM4A7MD48 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRRM4A7MD48 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
SRRM4A7MD48 AC032011.1-201ENST00000611703 1549 ntBASIC2.78□□□□□ -1.97
SRRM4A7MD48 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.78□□□□□ -1.97
SRRM4A7MD48 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SRRM4A7MD48 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SRRM4A7MD48 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.77□□□□□ -1.97
SRRM4A7MD48 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SRRM4A7MD48 FGF7P2-201ENST00000332473 296 ntBASIC2.77□□□□□ -1.97
SRRM4A7MD48 SNORA14A-201ENST00000364773 135 ntBASIC2.77□□□□□ -1.97
SRRM4A7MD48 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SRRM4A7MD48 RNU1-39P-201ENST00000383897 165 ntBASIC2.77□□□□□ -1.97
SRRM4A7MD48 Y_RNA.559-201ENST00000384686 107 ntBASIC2.77□□□□□ -1.97
SRRM4A7MD48 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SRRM4A7MD48 RNA5SP31-201ENST00000411144 127 ntBASIC2.77□□□□□ -1.97
SRRM4A7MD48 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.77□□□□□ -1.97
SRRM4A7MD48 RPS7P13-201ENST00000413955 498 ntBASIC2.77□□□□□ -1.97
SRRM4A7MD48 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.77□□□□□ -1.97
SRRM4A7MD48 AC092047.1-201ENST00000424997 240 ntBASIC2.77□□□□□ -1.97
SRRM4A7MD48 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.77□□□□□ -1.97
SRRM4A7MD48 RPL23AP82-202ENST00000427528 469 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms