Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 HMGB3P3-201ENST00000510526 400 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2□□□□□ -2.09
RBFOX3A6NFN3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 RNA5SP282-201ENST00000516355 108 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 RNU6-714P-201ENST00000516963 103 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2□□□□□ -2.09
RBFOX3A6NFN3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2□□□□□ -2.09
RBFOX3A6NFN3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2□□□□□ -2.09
RBFOX3A6NFN3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2□□□□□ -2.09
RBFOX3A6NFN3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2□□□□□ -2.09
RBFOX3A6NFN3 AC005951.2-201ENST00000576282 495 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2□□□□□ -2.09
RBFOX3A6NFN3 AC120053.1-201ENST00000607706 736 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 AC018926.1-201ENST00000616335 435 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 MTND1P37-201ENST00000636562 264 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 ZNF833P-201ENST00000424938 1494 ntBASIC2□□□□□ -2.09
RBFOX3A6NFN3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2□□□□□ -2.09
RBFOX3A6NFN3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AL139276.1-201ENST00000311910 1001 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 SNORA63.3-201ENST00000362682 132 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 RNU1-51P-201ENST00000365345 176 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 RNU6-637P-201ENST00000384050 107 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 OR4K6P-201ENST00000416478 897 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 COTL1P1-201ENST00000422309 375 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AC013262.1-201ENST00000426710 252 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AC098826.1-201ENST00000433943 471 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AL031659.1-201ENST00000447075 539 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 MTND1P9-201ENST00000453775 944 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 RPL18AP17-201ENST00000455326 198 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 ATG12P2-201ENST00000456830 416 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 FAM172BP-201ENST00000487497 1089 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 MTND2P31-201ENST00000512602 616 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AC112673.1-201ENST00000513168 575 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 RNU6-1028P-201ENST00000517164 93 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 NRON-201ENST00000517270 370 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AP003467.2-201ENST00000520175 319 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AP003168.1-201ENST00000530091 307 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 FTX_3.1-201ENST00000610451 147 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 MIR6895-201ENST00000613497 78 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 DDX10P1-201ENST00000448545 1933 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RBFOX3A6NFN3 FTLP6-201ENST00000355274 422 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 RNU6-1078P-201ENST00000364522 103 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 MIR888-201ENST00000401186 77 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 NDUFB4P4-201ENST00000404822 243 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AC068533.2-201ENST00000411872 306 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 MRPS36P1-201ENST00000421291 307 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 OR10R1P-201ENST00000441524 1141 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 RNU7-136P-201ENST00000458819 69 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 RPL31P50-201ENST00000471002 296 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 RNU5F-8P-201ENST00000515941 111 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 SCARNA17.1-201ENST00000516211 143 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 SCARNA17.2-201ENST00000516334 143 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AC023824.2-201ENST00000566185 400 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 MIR4658-201ENST00000584344 65 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AC008507.2-201ENST00000588402 1176 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AC136601.2-201ENST00000604356 474 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 SCARNA17.4-201ENST00000614296 143 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 HMGB1P24-202ENST00000615653 685 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AP000943.4-201ENST00000622912 357 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 AL137790.1-201ENST00000634283 177 ntBASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RBFOX3A6NFN3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms