Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC073325.2-201ENST00000339545 159 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 RNU6-432P-201ENST00000384196 109 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 MIR1284-201ENST00000408337 120 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 UBE2FP1-201ENST00000416536 447 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 USP9YP13-201ENST00000417797 480 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 BPY2DP-201ENST00000422208 265 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 ZYG11AP1-201ENST00000430329 837 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 USP12PX-201ENST00000432383 1057 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 RPS20P5-201ENST00000434808 360 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 RPS29P6-201ENST00000438196 145 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AL160314.1-201ENST00000490836 438 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC104629.1-201ENST00000494226 508 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 RPL37P25-201ENST00000507308 276 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC117522.3-201ENST00000507974 584 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 HMGB3P3-201ENST00000510526 400 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 RNU6-276P-201ENST00000516114 96 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC109329.2-201ENST00000519658 482 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 HMGN1P28-201ENST00000521340 364 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC118942.1-201ENST00000529674 1035 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AP000857.1-201ENST00000532151 543 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AF038458.1-201ENST00000588406 262 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC239868.4-201ENST00000608318 671 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC090115.4-201ENST00000609970 188 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AC100793.4-201ENST00000613683 429 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 AL138955.1-201ENST00000622881 1040 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV8-4A0A0B4J246 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RNU6-560P-201ENST00000364007 108 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 SNORA25.6-201ENST00000364121 118 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RNU6-777P-201ENST00000364265 104 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RNU6-621P-201ENST00000364752 109 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RNU1-138P-201ENST00000384093 164 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RNVU1-14-201ENST00000384770 164 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 MIR512-1-201ENST00000384913 84 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RNU6-220P-201ENST00000390919 107 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AL138885.1-201ENST00000405921 675 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 CCNG1P1-201ENST00000406783 885 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RN7SKP27-201ENST00000410684 333 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 SEPT2P1-201ENST00000419651 180 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 SUMO1P4-201ENST00000429430 302 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 MED14P1-201ENST00000430517 648 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC010153.1-201ENST00000432862 727 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RPL35AP22-201ENST00000436855 335 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC133134.1-201ENST00000466800 359 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AL121769.1-201ENST00000469473 401 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC117440.1-201ENST00000474107 571 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RBM43P1-201ENST00000476891 1081 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 RPS27AP10-201ENST00000496103 208 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 SNORA9.3-201ENST00000516383 129 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 MTND1P36-201ENST00000522384 936 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC023538.1-201ENST00000534576 736 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC135628.1-201ENST00000568867 534 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 MIR4429-201ENST00000580105 73 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 OR4K7P-201ENST00000580232 945 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 UBE2L4-201ENST00000587688 464 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 AC060766.3-201ENST00000591442 263 ntBASIC1.98□□□□□ -2.09
TRAV8-4A0A0B4J246 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms