Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU6-27P-201ENST00000516146 107 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AL157394.1-201ENST00000562983 1224 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC034268.2-201ENST00000571784 482 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 MIR4425-201ENST00000580572 84 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 BNIP3P22-201ENST00000593399 556 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AL161729.4-201ENST00000604650 476 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC007179.3-201ENST00000604976 235 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC012150.2-201ENST00000621300 544 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 CR381572.1-201ENST00000625098 102 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC068137.3-201ENST00000639191 341 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC099654.12-201ENST00000639868 649 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC073869.6-201ENST00000640656 341 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC005183.1-201ENST00000603687 1979 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 AC002546.1-201ENST00000588041 2504 ntBASIC3.61□□□□□ -1.83
SNX9Q9Y5X1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 Y_RNA.6-201ENST00000362350 114 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 RNVU1-3-201ENST00000364313 161 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 RN7SKP226-201ENST00000364912 300 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 RNU6-359P-201ENST00000365466 108 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 RNU6-761P-201ENST00000384148 107 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AL356421.1-201ENST00000403255 413 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC126124.2-201ENST00000413542 321 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 MTCO3P12-201ENST00000416718 547 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AL158156.1-201ENST00000422509 473 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC005300.1-201ENST00000428401 373 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC008264.1-201ENST00000447612 367 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 snoU13.22-201ENST00000459428 104 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AP002884.2-201ENST00000471647 395 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 COX7A2P2-201ENST00000505291 250 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC006390.1-201ENST00000508068 283 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 APOOP4-201ENST00000513530 597 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 SNORA31.20-201ENST00000517111 133 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AP003181.2-201ENST00000528941 181 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 EEF1B2P4-201ENST00000551398 348 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC005476.1-201ENST00000554427 397 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC090615.1-201ENST00000577519 154 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AP001094.1-201ENST00000579805 193 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AL162713.1-201ENST00000604480 262 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC004853.1-201ENST00000604902 698 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AL391813.2-201ENST00000609113 322 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC092794.1-201ENST00000612734 582 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AC040168.1-201ENST00000623594 991 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 SNORA50A-202ENST00000629536 136 ntBASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNX9Q9Y5X1 AL136164.4-201ENST00000625013 2135 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 AC027514.1-201ENST00000588561 1603 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RNU6-50P-201ENST00000362356 103 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RNU6-1042P-201ENST00000384204 107 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 SNORD51-201ENST00000384320 80 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 MIR591-201ENST00000385290 95 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RNA5SP129-201ENST00000410276 118 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RNU4-78P-201ENST00000410940 126 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 AC005326.1-201ENST00000429197 123 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 AC104308.1-201ENST00000454621 333 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RPS20P24-201ENST00000457473 361 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 AC091153.1-201ENST00000466297 402 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RN7SL601P-201ENST00000471221 293 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RPL32P34-201ENST00000486380 400 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RPL21P13-201ENST00000488305 481 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RNA5SP468-201ENST00000516782 93 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 SNORA18.6-201ENST00000516792 115 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 RN7SKP60-201ENST00000516985 239 ntBASIC3.59□□□□□ -1.83
SNX9Q9Y5X1 AC107934.2-201ENST00000518653 310 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms