Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 NOTCH2P1-201ENST00000443481 624 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKP3Q9Y446 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC022364.2-201ENST00000457963 554 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 snoU13.24-201ENST00000458998 104 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC092451.1-201ENST00000480211 153 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 AP001086.1-201ENST00000494882 321 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 VN1R104P-201ENST00000505115 1009 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 ARL4AP2-201ENST00000507378 601 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC109635.4-202ENST00000531666 412 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 HMGB1P33-201ENST00000563485 527 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC098848.2-201ENST00000588023 330 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 AF038458.1-201ENST00000588406 262 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 Z84480.1-201ENST00000605131 311 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 SNHG22-203ENST00000617833 660 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 AC139792.3-201ENST00000623525 224 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AL732372.2-225ENST00000642124 456 ntBASIC3.66□□□□□ -1.82
PKP3Q9Y446 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKP3Q9Y446 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKP3Q9Y446 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PKP3Q9Y446 AP001350.1-201ENST00000601906 1524 ntBASIC3.65□□□□□ -1.82
PKP3Q9Y446 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.65□□□□□ -1.82
PKP3Q9Y446 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PKP3Q9Y446 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.65□□□□□ -1.82
PKP3Q9Y446 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PKP3Q9Y446 Y_RNA.159-201ENST00000363674 87 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PKP3Q9Y446 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 RNU6-39P-201ENST00000384344 107 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 U8.11-201ENST00000384699 133 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 U8.12-201ENST00000384701 133 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 MIR554-201ENST00000384874 96 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 SNORD115-47-201ENST00000391226 86 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AL136372.1-201ENST00000403060 228 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 Z98941.1-201ENST00000407764 100 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 MRPS10P2-201ENST00000431226 381 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC007389.2-201ENST00000434630 306 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC024082.2-201ENST00000434771 238 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 NDUFB1P1-201ENST00000435191 180 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 RPL23AP20-201ENST00000447965 421 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 MTND2P24-201ENST00000453434 806 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 U8.18-201ENST00000459285 133 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AL121769.1-201ENST00000469473 401 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 RPS27AP1-201ENST00000475545 471 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC109927.2-201ENST00000506416 303 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC004062.1-201ENST00000509926 645 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 ARL2BPP6-201ENST00000512757 439 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 RNU2-58P-201ENST00000516403 183 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC100870.1-201ENST00000522035 505 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PKP3Q9Y446 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 ARL2BPP2-201ENST00000550907 489 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC007363.1-201ENST00000604736 620 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AL109618.2-201ENST00000605527 211 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC012443.1-201ENST00000605605 231 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC017083.3-201ENST00000609955 700 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 AL360181.4-201ENST00000621752 134 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 FRG1KP-201ENST00000623592 341 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 AC106871.1-201ENST00000568324 3102 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PKP3Q9Y446 RPS4XP5-202ENST00000449995 1334 ntBASIC3.65□□□□□ -1.83
PKP3Q9Y446 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PKP3Q9Y446 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PKP3Q9Y446 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PKP3Q9Y446 GABPAP-201ENST00000419271 1356 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 Y_RNA.126-201ENST00000363382 111 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 RNU6-1284P-201ENST00000363701 100 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 RNU6-76P-201ENST00000384060 104 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms