Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 RPS15AP5-201ENST00000436276 388 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 RPL26P9-201ENST00000457466 433 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 RPS27P27-201ENST00000498779 255 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 OR4R1P-201ENST00000529879 463 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 AC004486.1-201ENST00000546846 233 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 AC007954.1-201ENST00000554198 494 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 AC009268.2-201ENST00000621925 457 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 AL356094.1-201ENST00000624663 1212 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 AP001002.2-201ENST00000625137 386 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 AL137790.1-201ENST00000634283 177 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 ZNF833P-201ENST00000424938 1494 ntBASIC2.32□□□□□ -2.04
RHBDD3Q9Y3P4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-750P-201ENST00000390946 107 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 MTND1P21-201ENST00000412991 285 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 MRPS36P1-201ENST00000421291 307 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AP000705.1-201ENST00000454567 350 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 KC877373.1-201ENST00000479066 408 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AC090096.1-201ENST00000489168 390 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 MTCO3P27-201ENST00000514397 196 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-583P-201ENST00000516012 92 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 RNU6-714P-201ENST00000516963 103 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 NRON-201ENST00000517270 370 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 NDUFS5P6-201ENST00000529136 295 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AC079600.2-201ENST00000550076 130 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AL136520.1-202ENST00000555494 763 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 MIR3670-2-201ENST00000582974 65 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 MIR3670-1-201ENST00000584160 65 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 MIR3670-3-201ENST00000584855 65 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AC099785.1-201ENST00000605697 437 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 AP002802.2-201ENST00000605877 235 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 BX664608.1-201ENST00000610519 487 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 MIR3670-4-201ENST00000612260 65 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 HMGB1P24-202ENST00000615653 685 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 MTND4P27-201ENST00000450813 1354 ntBASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RHBDD3Q9Y3P4 FTLP6-201ENST00000355274 422 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 SNORA9-201ENST00000384215 133 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 RPS4XP7-201ENST00000406274 780 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 RNA5SP21-201ENST00000410917 96 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AL513331.1-201ENST00000411908 397 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC023141.4-201ENST00000412031 328 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC007919.1-201ENST00000429380 217 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 HMGB1P9-201ENST00000429856 646 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 RPS24P13-201ENST00000442520 397 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC027673.1-201ENST00000456245 405 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 ATG12P2-201ENST00000456830 416 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 TBCAP3-201ENST00000512475 312 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC006499.2-201ENST00000513470 337 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 RN7SKP31-201ENST00000516354 278 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 MIR3200-201ENST00000580767 85 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 MIR4635-201ENST00000583759 79 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 MIR4658-201ENST00000584344 65 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC136601.2-201ENST00000604356 474 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC239868.4-201ENST00000608318 671 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 AC023158.2-201ENST00000614876 543 ntBASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.3□□□□□ -2.04
RHBDD3Q9Y3P4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms