Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RNA5SP27-201ENST00000363839 119 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 MIR147B-201ENST00000390185 80 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 CISD1P1-201ENST00000393907 327 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 RPS3AP24-201ENST00000407896 734 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 RNU4-78P-201ENST00000410940 126 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AC074117.2-201ENST00000417130 397 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AL353729.1-201ENST00000425044 720 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AL445669.1-201ENST00000426743 755 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 HSPE1P21-201ENST00000438283 308 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 SNORD121B-201ENST00000458838 81 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AC023141.11-201ENST00000508864 202 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 RNU6-295P-201ENST00000516901 104 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 SNRPGP16-201ENST00000533275 226 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AC090888.1-201ENST00000561335 1141 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 EIF5A2P1-201ENST00000564027 460 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 MIR4299-201ENST00000577899 72 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 MIR4255-201ENST00000579351 72 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AC011494.1-201ENST00000596454 237 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AC135507.1-201ENST00000607214 561 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AC103710.4-201ENST00000609301 899 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 MIR7515-201ENST00000637837 67 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AC006026.1-201ENST00000444025 1803 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 AL359893.1-201ENST00000447628 1580 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 MTND4P23-201ENST00000447723 1363 ntBASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 RNU6-263P-201ENST00000363811 107 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 SFR1P1-201ENST00000403720 688 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 MIR1304-201ENST00000408243 91 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AL133384.1-201ENST00000412744 351 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 HMGB3P31-201ENST00000413333 595 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC007098.1-201ENST00000420122 367 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC003685.2-201ENST00000422795 395 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AIMP1P2-201ENST00000425294 312 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 HMGN2P3-201ENST00000433603 273 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 HMGN2P5-201ENST00000436882 273 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AL353689.1-201ENST00000438895 199 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AL357134.1-201ENST00000445848 426 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 KLF3P2-201ENST00000465138 268 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 FO393415.2-201ENST00000480085 343 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 MTCYBP17-201ENST00000503579 789 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC116337.1-201ENST00000509680 687 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC117522.2-201ENST00000510049 657 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 MRPS36P2-201ENST00000512569 299 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 Y_RNA.675-201ENST00000516389 149 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 SNORA25.15-201ENST00000516487 89 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AP004607.1-201ENST00000524456 203 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AP005639.2-201ENST00000527592 928 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 MTCYBP23-201ENST00000558717 1102 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 OR4G1P-201ENST00000588632 938 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC098826.3-201ENST00000603823 466 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC010678.1-201ENST00000614118 713 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 MIR7843-201ENST00000622274 79 ntBASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
UBE2D4Q9Y2X8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 SNORA23-201ENST00000365128 182 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 MIR493-201ENST00000385254 89 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 MIR767-201ENST00000390228 109 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 RNU6-955P-201ENST00000410497 104 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AL358453.1-201ENST00000422522 250 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 PNPLA4P1-201ENST00000458328 305 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 snoU13.15-201ENST00000459407 104 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AC087588.1-201ENST00000462203 316 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AC108210.2-201ENST00000503681 201 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 RNU6-928P-201ENST00000516876 104 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 CYCSP2-201ENST00000558168 301 ntBASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.05□□□□□ -2.24
UBE2D4Q9Y2X8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms