Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RPL17P49-201ENST00000443728 411 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 RPL7P47-201ENST00000497299 556 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 FCF1P8-201ENST00000510322 597 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 SNORA31.8-201ENST00000516327 108 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 MIR4325-201ENST00000583049 90 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 NRBF2P1-201ENST00000587407 859 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 CKS1BP3-201ENST00000600888 237 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AP003465.2-201ENST00000602571 373 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AL606834.2-201ENST00000602954 668 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AL031176.1-201ENST00000604554 466 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AL390240.1-201ENST00000612950 384 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 PLCE1P1-201ENST00000622094 305 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 PISRT1-201ENST00000626175 531 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AC099654.13-201ENST00000639774 207 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AC099654.12-201ENST00000639868 649 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 Z83843.1-201ENST00000604070 3685 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AC138915.3-201ENST00000562908 1389 ntBASIC5.42□□□□□ -1.54
CDK11AQ9UQ88 AL136164.4-201ENST00000625013 2135 ntBASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 MRPL42P2-201ENST00000403169 426 ntBASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 MTND1P9-201ENST00000453775 944 ntBASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 RPL9P33-201ENST00000484311 566 ntBASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 MTND1P5-201ENST00000517906 940 ntBASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 MIR5004-201ENST00000579078 107 ntBASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 AC006557.5-201ENST00000603126 811 ntBASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 AC121334.2-201ENST00000605387 271 ntBASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 AL590099.1-201ENST00000615276 138 ntBASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK11AQ9UQ88 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC091152.2-201ENST00000591628 2569 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC011460.1-201ENST00000636268 1834 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC104651.1-201ENST00000427559 735 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 MTND1P1-201ENST00000445453 368 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC107401.1-201ENST00000503426 685 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC022616.6-201ENST00000520479 119 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 CR383656.7-201ENST00000548164 174 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC011451.2-201ENST00000604303 598 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AL022154.1-201ENST00000604698 785 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC108747.1-201ENST00000609508 535 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AL110115.1-201ENST00000614396 364 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC009159.1-201ENST00000618386 642 ntBASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK11AQ9UQ88 AC007656.2-201ENST00000624902 4547 ntBASIC5.4□□□□□ -1.55
CDK11AQ9UQ88 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
CDK11AQ9UQ88 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDK11AQ9UQ88 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CDK11AQ9UQ88 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 RNY4P34-201ENST00000364779 95 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 MIR591-201ENST00000385290 95 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 FCF1P9-201ENST00000412546 282 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 YPEL5P1-201ENST00000419731 367 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC004866.2-201ENST00000438285 481 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 GAPDHP17-201ENST00000449858 1001 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 RPS27AP1-201ENST00000475545 471 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC105252.1-201ENST00000503089 286 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC110794.1-201ENST00000505816 425 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 Y_RNA.672-201ENST00000516289 104 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 MTCO2P4-201ENST00000517968 247 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AP000907.2-201ENST00000530827 353 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 DUXAP4-201ENST00000603046 613 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 BRDTP1-201ENST00000605735 677 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC098614.4-201ENST00000607601 462 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC135507.2-201ENST00000612443 309 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC073534.2-201ENST00000620377 381 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AC110994.2-201ENST00000635481 492 ntBASIC5.39□□□□□ -1.55
CDK11AQ9UQ88 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms