Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 RPL23AP81-201ENST00000455252 467 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 AC087884.1-201ENST00000469738 328 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 AC117503.1-201ENST00000472241 394 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 PARP1P2-201ENST00000556806 195 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 LARP7P2-201ENST00000575306 125 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDZRN3Q9UPQ7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 Y_RNA.488-201ENST00000384403 102 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-1151P-201ENST00000384684 107 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 GLULP6-201ENST00000399502 913 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 BX323845.1-201ENST00000432417 179 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AL356981.1-201ENST00000454879 684 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AC108059.3-201ENST00000456388 214 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 snoU13.1-201ENST00000459157 104 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AC144568.1-201ENST00000520139 137 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AC025423.5-201ENST00000550230 219 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 SULT1C2P1-202ENST00000562418 459 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AP001005.3-201ENST00000622049 129 ntBASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDZRN3Q9UPQ7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 STX3-208ENST00000641815 3236 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 TCP11X1-202ENST00000622971 1372 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC126755.2-208ENST00000327792 462 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC138969.1-213ENST00000331436 462 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 RNU1-76P-201ENST00000362903 159 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC068538.1-201ENST00000376856 336 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 SNORA2.3-201ENST00000383920 135 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 SNORD116-18-201ENST00000383961 92 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-708P-201ENST00000384217 107 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-1035P-201ENST00000384477 107 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AL356421.1-201ENST00000403255 413 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC007738.1-201ENST00000413892 348 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 COX6CP13-201ENST00000428703 226 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 RPL35AP21-201ENST00000437667 333 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC104806.1-201ENST00000508720 308 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 ENPP7P9-201ENST00000514456 627 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 SNORD116-28-201ENST00000516123 91 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC126177.3-201ENST00000551839 688 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC074050.1-201ENST00000563247 211 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 MIR4300-201ENST00000581016 96 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC007619.2-201ENST00000605743 379 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AL596275.2-204ENST00000641628 552 ntBASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.35□□□□□ -1.39
PDZRN3Q9UPQ7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 AC009643.2-201ENST00000603543 1448 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 Y_RNA.127-201ENST00000363386 109 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-666P-201ENST00000363499 107 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-61P-201ENST00000365528 109 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 MIR625-201ENST00000385047 85 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-550P-201ENST00000391057 101 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 RNU6-257P-201ENST00000410238 98 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 RN7SKP235-201ENST00000410662 305 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 PSMA2P3-201ENST00000429685 675 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 RPL12P18-201ENST00000437175 325 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 AL035551.1-201ENST00000446931 348 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 RPL37P6-202ENST00000464216 403 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 RPL21P71-201ENST00000465598 459 ntBASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.34□□□□□ -1.39
PDZRN3Q9UPQ7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms