Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 MIR6715B-201ENST00000637172 77 ntBASIC4.38□□□□□ -1.71
USP18Q9UMW8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP18Q9UMW8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP18Q9UMW8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP18Q9UMW8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP18Q9UMW8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 RNU6-552P-201ENST00000362869 119 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 Y_RNA.231-201ENST00000364358 102 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 RNU4-20P-201ENST00000365601 151 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 RNU6-837P-201ENST00000391056 108 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL356432.1-201ENST00000405809 419 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 RNU2-29P-201ENST00000410423 189 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 RN7SKP177-201ENST00000410567 355 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 RPL21P24-201ENST00000413752 448 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 UBE2FP1-201ENST00000416536 447 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL137014.1-201ENST00000420490 1226 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 RWDD4P2-201ENST00000426392 563 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC008850.1-201ENST00000427546 362 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 TAAR7P-201ENST00000436141 242 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL162389.1-201ENST00000449233 177 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC006517.1-201ENST00000480485 328 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC017037.1-201ENST00000508460 471 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 RNU4-29P-201ENST00000515943 174 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 RNU6-1092P-201ENST00000516955 87 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 TRMT10BP1-201ENST00000519377 943 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC243972.3-201ENST00000539655 198 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC069240.1-201ENST00000548774 375 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 MIR5685-201ENST00000579080 79 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 MIR4424-201ENST00000585257 86 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL606490.9-201ENST00000603331 271 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 IGHV3-29-201ENST00000604817 344 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 RNU6-89P-201ENST00000606519 100 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AC243312.2-201ENST00000623340 601 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 RLIMP1-201ENST00000339626 1680 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL133243.3-201ENST00000617415 3004 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.37□□□□□ -1.71
USP18Q9UMW8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP18Q9UMW8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP18Q9UMW8 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.37□□□□□ -1.71
USP18Q9UMW8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.36□□□□□ -1.71
USP18Q9UMW8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP18Q9UMW8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
USP18Q9UMW8 AC090229.1-201ENST00000590983 1609 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP18Q9UMW8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP18Q9UMW8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
USP18Q9UMW8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
USP18Q9UMW8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP18Q9UMW8 RNU6-1029P-201ENST00000384109 107 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
USP18Q9UMW8 AL583834.1-201ENST00000406943 343 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 RN7SKP32-201ENST00000410167 303 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 AC114491.1-201ENST00000416095 246 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 AC018630.2-202ENST00000422992 927 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 RPL35AP12-201ENST00000425362 338 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 DUTP6-201ENST00000425573 462 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 RPL7P12-201ENST00000446719 750 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 GAPDHP27-201ENST00000447427 1020 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 MTND1P18-201ENST00000448191 573 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 AL118520.1-201ENST00000450770 291 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 OR5AL2P-201ENST00000532185 920 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.36□□□□□ -1.71
USP18Q9UMW8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.36□□□□□ -1.71
USP18Q9UMW8 AC078814.3-201ENST00000553036 491 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 NCAPGP2-201ENST00000557911 754 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.36□□□□□ -1.71
USP18Q9UMW8 MIR4703-201ENST00000577728 79 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 RN7SL600P-201ENST00000581811 299 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.36□□□□□ -1.71
USP18Q9UMW8 AL161729.3-201ENST00000603533 673 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 AL158196.1-201ENST00000616786 434 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 SNHG22-203ENST00000617833 660 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 uc_338.11-201ENST00000619132 160 ntBASIC4.36□□□□□ -1.71
USP18Q9UMW8 AC009248.2-201ENST00000619826 254 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms