Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 Y_RNA.460-201ENST00000384255 102 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 RNU6-817P-201ENST00000391083 104 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 UBE2V1P2-201ENST00000397758 440 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC011933.1-201ENST00000413334 321 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 USP9YP20-201ENST00000419224 558 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AL139095.3-201ENST00000419672 1203 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC011998.1-201ENST00000433403 117 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 HSPE1P6-201ENST00000479457 291 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC091167.1-201ENST00000492017 396 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 Y_RNA.689-201ENST00000516589 107 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 IGKV2D-23-201ENST00000518179 286 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC109635.4-202ENST00000531666 412 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 CYCSP29-201ENST00000533731 318 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC074050.1-201ENST00000563247 211 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC067852.3-201ENST00000589177 561 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AL592436.1-201ENST00000605135 558 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 MIR4727-201ENST00000622232 55 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 AC090574.1-201ENST00000623186 233 ntBASIC5.06□□□□□ -1.6
DDX41Q9UJV9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DDX41Q9UJV9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 OR5P1P-201ENST00000299512 925 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 RNA5SP502-201ENST00000362694 119 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 Y_RNA.126-201ENST00000363382 111 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 RNU6-522P-201ENST00000364497 107 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 MIR708-201ENST00000390708 88 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 RNU6-1148P-201ENST00000410992 104 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 PHBP16-201ENST00000446318 950 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 NUTF2P3-201ENST00000448540 384 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 DHFRP3-201ENST00000455595 559 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 SCARNA18-201ENST00000459004 134 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 AC006499.6-201ENST00000511169 607 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 RNA5SP446-201ENST00000515955 82 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 RNU6-1038P-201ENST00000516516 104 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 AP000763.2-201ENST00000540641 163 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 AL020997.2-201ENST00000602607 184 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 MIR6891-201ENST00000618788 93 ntBASIC5.05□□□□□ -1.6
DDX41Q9UJV9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DDX41Q9UJV9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 Y_RNA.378-201ENST00000365652 113 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 Y_RNA.414-201ENST00000384011 101 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 RNU6-831P-201ENST00000384548 107 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AL583835.1-201ENST00000399570 407 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC016831.2-201ENST00000417179 352 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC012671.1-201ENST00000451912 203 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 RPL37P6-201ENST00000460682 294 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC108860.1-201ENST00000484521 383 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC026464.5-201ENST00000562497 722 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC044792.1-201ENST00000593294 196 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 BPIFA4P-203ENST00000603168 689 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC007619.2-201ENST00000605743 379 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC103710.3-201ENST00000608157 948 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 MTND5P42-201ENST00000637720 498 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 MIR1302-1-201ENST00000637932 143 ntBASIC5.04□□□□□ -1.6
DDX41Q9UJV9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.04□□□□□ -1.6
DDX41Q9UJV9 AC121333.1-201ENST00000567488 2709 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 AC006026.1-201ENST00000444025 1803 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DDX41Q9UJV9 DEFB108F-201ENST00000344638 222 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 U3.12-201ENST00000364498 214 ntBASIC5.03□□□□□ -1.6
DDX41Q9UJV9 RNA5SP366-201ENST00000365454 123 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms