Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SCN11AQ9UI33 Y_RNA.36-201ENST00000362602 112 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 RNU6-461P-201ENST00000364195 107 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 RNA5SP139-201ENST00000364340 117 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.75□□□□□ -2.13
SCN11AQ9UI33 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.75□□□□□ -2.13
SCN11AQ9UI33 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
SCN11AQ9UI33 AC008885.2-201ENST00000509506 930 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 AC113155.1-201ENST00000511141 769 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 AL138976.2-201ENST00000563989 694 ntBASIC1.75□□□□□ -2.13
SCN11AQ9UI33 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.75□□□□□ -2.13
SCN11AQ9UI33 AC007342.9-201ENST00000623877 1385 ntBASIC1.74□□□□□ -2.13
SCN11AQ9UI33 RNU1-22P-201ENST00000363334 158 ntBASIC1.74□□□□□ -2.13
SCN11AQ9UI33 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.74□□□□□ -2.13
SCN11AQ9UI33 Z85994.2-201ENST00000434327 452 ntBASIC1.74□□□□□ -2.13
SCN11AQ9UI33 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.74□□□□□ -2.13
SCN11AQ9UI33 HMGN2P18-201ENST00000450680 270 ntBASIC1.74□□□□□ -2.13
SCN11AQ9UI33 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.74□□□□□ -2.13
SCN11AQ9UI33 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SCN11AQ9UI33 AC083806.3-201ENST00000614016 455 ntBASIC1.74□□□□□ -2.13
SCN11AQ9UI33 uc_338.12-201ENST00000616344 181 ntBASIC1.74□□□□□ -2.13
SCN11AQ9UI33 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.74□□□□□ -2.13
SCN11AQ9UI33 AL031601.2-202ENST00000622650 282 ntBASIC1.74□□□□□ -2.13
SCN11AQ9UI33 AC079597.1-201ENST00000624306 508 ntBASIC1.74□□□□□ -2.13
SCN11AQ9UI33 AC068700.1-201ENST00000565862 3754 ntBASIC1.73□□□□□ -2.13
SCN11AQ9UI33 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 Y_RNA.295-201ENST00000364918 102 ntBASIC1.73□□□□□ -2.13
SCN11AQ9UI33 RNA5SP105-201ENST00000391123 113 ntBASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AL591034.1-201ENST00000407447 340 ntBASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 RNU1-104P-201ENST00000517280 175 ntBASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AC019176.1-201ENST00000518519 225 ntBASIC1.73□□□□□ -2.13
SCN11AQ9UI33 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 OSBPL9P3-201ENST00000534523 595 ntBASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 BNIP3P4-201ENST00000604946 565 ntBASIC1.73□□□□□ -2.13
SCN11AQ9UI33 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 uc_338.9-201ENST00000617424 182 ntBASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN11AQ9UI33 AL030996.1-201ENST00000411430 235 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AL445669.1-201ENST00000426743 755 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AC010301.1-201ENST00000473936 355 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 HMGB1P46-201ENST00000520062 610 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AP003033.1-201ENST00000527244 415 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AC008739.2-201ENST00000597006 317 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.72□□□□□ -2.13
SCN11AQ9UI33 MIR6788-201ENST00000618842 66 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 RNU1-52P-201ENST00000384190 164 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 ERHP2-201ENST00000402323 299 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AL023807.1-201ENST00000407932 359 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN11AQ9UI33 RPL21P66-201ENST00000426566 466 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN11AQ9UI33 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.72□□□□□ -2.13
SCN11AQ9UI33 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AC006499.2-201ENST00000513470 337 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN11AQ9UI33 GLUD1P4-201ENST00000590914 418 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AC012640.5-201ENST00000623897 319 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AP003072.4-201ENST00000624580 310 ntBASIC1.72□□□□□ -2.13
SCN11AQ9UI33 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCN11AQ9UI33 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.72□□□□□ -2.13
SCN11AQ9UI33 AP001350.1-201ENST00000601906 1524 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 MIR524-201ENST00000385242 87 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 MIR548J-201ENST00000408833 112 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 UBE2V1P13-201ENST00000436983 439 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
SCN11AQ9UI33 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN11AQ9UI33 RPS23P3-201ENST00000470993 430 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 AC004223.1-201ENST00000479840 271 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SCN11AQ9UI33 AC139103.1-201ENST00000534696 1030 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN11AQ9UI33 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN11AQ9UI33 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.71□□□□□ -2.14
SCN11AQ9UI33 MTCO1P40-201ENST00000574371 625 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 AC106028.5-201ENST00000610332 395 ntBASIC1.71□□□□□ -2.14
SCN11AQ9UI33 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SCN11AQ9UI33 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 MIR17-201ENST00000385012 84 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 RPL35AP22-201ENST00000436855 335 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN11AQ9UI33 HMGB1P26-201ENST00000452520 628 ntBASIC1.7□□□□□ -2.14
SCN11AQ9UI33 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms