Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC017037.3-201ENST00000625016 472 ntBASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.25□□□□□ -1.89
CLIP2Q9UDT6 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 TAB3P1-202ENST00000452645 1634 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 RNU6-799P-201ENST00000363567 107 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 RNA5SP80-201ENST00000410475 111 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 RAP1BP1-201ENST00000412709 553 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 MTATP6P20-201ENST00000414147 562 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC107081.1-201ENST00000414975 361 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 MTATP6P27-201ENST00000416987 621 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 NUP35P1-201ENST00000422734 947 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC063976.3-201ENST00000426849 329 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 USP9YP28-201ENST00000435142 589 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 NANOGP2-201ENST00000435391 727 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 Z96811.1-201ENST00000445880 108 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AL031313.1-201ENST00000448435 256 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AL109933.2-201ENST00000452651 260 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 MTCO3P11-201ENST00000455103 774 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 RPS29P12-201ENST00000460178 152 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 RPS27AP9-201ENST00000477681 438 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 RN7SL297P-201ENST00000483161 293 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC134050.1-201ENST00000495088 933 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC010486.2-201ENST00000505572 483 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 CBX3P3-201ENST00000508108 532 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 RNU6-311P-201ENST00000516224 102 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 ZNF321P-202ENST00000550843 495 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC015688.2-201ENST00000584523 262 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 ZNF861P-201ENST00000588126 639 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AL031176.1-201ENST00000604554 466 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AL596245.1-201ENST00000618994 362 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AL356473.1-201ENST00000406203 1408 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 AL445523.1-201ENST00000451184 1362 ntBASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.24□□□□□ -1.89
CLIP2Q9UDT6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 Y_RNA.169-201ENST00000363745 96 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 SNORD56.5-201ENST00000364281 72 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 RNU6-413P-201ENST00000384115 107 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 RNU6-882P-201ENST00000391025 103 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 DHFRP6-201ENST00000401776 268 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AL136310.1-201ENST00000404926 654 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 RNU2-47P-201ENST00000410649 186 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 BEND7P1-201ENST00000422058 457 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 MTCO2P5-201ENST00000422621 426 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 USP9YP11-201ENST00000427537 717 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 RPL23AP76-201ENST00000441860 458 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 Z73417.1-201ENST00000447373 778 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC007327.1-201ENST00000447461 264 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 MTND1P27-201ENST00000451117 902 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC008837.2-201ENST00000513076 418 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC006499.2-201ENST00000513470 337 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC022861.1-201ENST00000522981 663 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 ELOCP31-201ENST00000540463 467 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 MIR3162-201ENST00000581818 82 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC010620.1-201ENST00000601088 1102 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AL022099.1-201ENST00000604551 712 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC091304.6-201ENST00000619761 202 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AP000676.3-201ENST00000623299 569 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 AC011460.1-201ENST00000636268 1834 ntBASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
CLIP2Q9UDT6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 RNU4-22P-201ENST00000411058 166 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC010099.3-201ENST00000423896 409 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 BX119904.4-201ENST00000424402 301 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC019097.1-201ENST00000424783 735 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 UBBP3-201ENST00000445497 241 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 OR6K5P-201ENST00000447050 945 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 ARPC3P5-201ENST00000448802 534 ntBASIC3.22□□□□□ -1.89
CLIP2Q9UDT6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms