Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 BMI1P1-201ENST00000445879 941 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AC008413.1-201ENST00000511864 177 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 SCARNA17.1-201ENST00000516211 143 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 SCARNA17.2-201ENST00000516334 143 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 RNU6-1282P-201ENST00000516735 96 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AC103833.1-201ENST00000517442 172 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AC093510.2-201ENST00000562820 896 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 SCARNA17.4-201ENST00000614296 143 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 MIR6852-201ENST00000621699 66 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
VPS29Q9UBQ0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 RNU5A-1-201ENST00000362698 116 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 RNA5SP138-201ENST00000365098 114 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 RNU6-301P-201ENST00000384277 107 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 SNORA51.11-201ENST00000384442 131 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AL023284.1-201ENST00000403956 276 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 RN7SKP32-201ENST00000410167 303 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AL139156.1-201ENST00000412785 841 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 Z98742.3-201ENST00000418637 326 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC244453.4-201ENST00000419150 388 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 Z93242.1-201ENST00000427102 353 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC007000.2-201ENST00000442564 487 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 RPL7P36-201ENST00000444633 681 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 CBWD4P-201ENST00000445695 655 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC092757.1-201ENST00000467293 467 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 RPL9P6-201ENST00000492764 598 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 COL6A4P2-205ENST00000509855 506 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC109471.1-201ENST00000511631 612 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 SCARNA11.3-201ENST00000517276 130 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC022634.1-201ENST00000520765 532 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC008127.2-201ENST00000549925 1075 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC009090.3-201ENST00000616553 565 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AL590808.1-201ENST00000618696 141 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AL031601.2-202ENST00000622650 282 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 AC080128.1-201ENST00000474389 1917 ntBASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS29Q9UBQ0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 OR56A5-201ENST00000340110 738 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 RNU6-878P-201ENST00000384578 110 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 SNORA64-201ENST00000384674 134 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AP002784.2-201ENST00000397300 549 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 RNA5SP80-201ENST00000410475 111 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 HMGB3P2-201ENST00000411913 584 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC007560.1-201ENST00000426912 237 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 MYL8P-204ENST00000431574 518 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC096638.1-201ENST00000444678 216 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 MTATP6P7-201ENST00000453315 681 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC084024.2-201ENST00000503480 791 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 KLRA1P-201ENST00000503499 986 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 NIFKP8-201ENST00000560500 874 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC087465.1-201ENST00000560574 245 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC135628.1-201ENST00000568867 534 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 OR4K8P-201ENST00000578842 1048 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AL022067.1-201ENST00000602426 454 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 RMST_10.1-201ENST00000616309 154 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AL449363.1-201ENST00000617815 186 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AL162233.1-201ENST00000620014 944 ntBASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
VPS29Q9UBQ0 MTND4P27-201ENST00000450813 1354 ntBASIC1.91□□□□□ -2.1
VPS29Q9UBQ0 FAM133CP-201ENST00000332869 704 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms