Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC022880.1-201ENST00000534017 973 ntBASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 SETP7-201ENST00000552169 453 ntBASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 MIMT1-201ENST00000597105 1050 ntBASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 AL355297.2-201ENST00000604792 129 ntBASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 AC010329.5-201ENST00000623497 2174 ntBASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.49□□□□□ -2.17
COMMD3Q9UBI1 AC011477.1-204ENST00000623416 1325 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC103710.2-202ENST00000641454 2853 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 RPL23AP39-201ENST00000415533 405 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AL035410.1-201ENST00000427409 427 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC003989.2-201ENST00000440224 169 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC104164.3-201ENST00000467363 1258 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 RPL31P50-201ENST00000471002 296 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 RPL9P6-201ENST00000492764 598 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 RPS29P11-201ENST00000496507 171 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 OR8K4P-201ENST00000534608 872 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 MIR3921-201ENST00000577308 85 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC025165.5-201ENST00000602802 578 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC021749.1-201ENST00000604322 607 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AL022099.1-201ENST00000604551 712 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC010738.1-201ENST00000604970 987 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 AC068944.2-201ENST00000610373 403 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 ZNF663P-202ENST00000641770 1131 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 MTCO1P4-201ENST00000520516 1409 ntBASIC1.48□□□□□ -2.17
COMMD3Q9UBI1 MTND5P31-201ENST00000419366 1374 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC130650.2-201ENST00000618736 2403 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 POLHP1-201ENST00000411806 470 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 FCF1P2-201ENST00000415284 583 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AL356320.1-201ENST00000429616 163 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 Z98742.2-201ENST00000431564 187 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AL049714.1-201ENST00000466686 347 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC072039.1-201ENST00000477611 581 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC106872.3-201ENST00000495104 446 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AL359273.1-201ENST00000510918 627 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 SCARNA17.1-201ENST00000516211 143 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 SCARNA17.2-201ENST00000516334 143 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC018618.2-201ENST00000604770 446 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 SCARNA17.4-201ENST00000614296 143 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC005296.1-201ENST00000616145 209 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AL391597.1-201ENST00000618707 694 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC017104.5-201ENST00000637647 639 ntBASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
COMMD3Q9UBI1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
COMMD3Q9UBI1 DEFB108F-201ENST00000344638 222 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 RNU6-891P-201ENST00000384280 111 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 MIR649-201ENST00000384843 97 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 MIR1290-201ENST00000408735 78 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 AC008173.1-201ENST00000418901 264 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 AC012497.1-201ENST00000429392 575 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 OR10R1P-201ENST00000441524 1141 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 FABP5P13-201ENST00000452144 328 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 HMGN3P1-201ENST00000453847 193 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 PMCHL2-203ENST00000457791 237 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 DYNLL1P5-201ENST00000467158 270 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 RPL23AP42-201ENST00000471152 471 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 SNORA31.25-201ENST00000517242 134 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 RNU2-19P-201ENST00000517288 84 ntBASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.46□□□□□ -2.18
COMMD3Q9UBI1 DEFB108D-201ENST00000527787 222 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms