Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.18□□□□□ -2.22
CHD7Q9P2D1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
CHD7Q9P2D1 ACTR3BP3-201ENST00000565577 979 ntBASIC1.18□□□□□ -2.22
CHD7Q9P2D1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.18□□□□□ -2.22
CHD7Q9P2D1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CHD7Q9P2D1 AC104308.1-201ENST00000454621 333 ntBASIC1.18□□□□□ -2.22
CHD7Q9P2D1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.18□□□□□ -2.22
CHD7Q9P2D1 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
CHD7Q9P2D1 AC110792.2-201ENST00000510278 224 ntBASIC1.18□□□□□ -2.22
CHD7Q9P2D1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.18□□□□□ -2.22
CHD7Q9P2D1 AC091057.2-201ENST00000602594 792 ntBASIC1.18□□□□□ -2.22
CHD7Q9P2D1 AC000123.2-201ENST00000623124 461 ntBASIC1.18□□□□□ -2.22
CHD7Q9P2D1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 Y_RNA.258-201ENST00000364613 105 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 NEFMP1-201ENST00000443423 1006 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 MIR514B-201ENST00000516774 80 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AC113155.1-201ENST00000511141 769 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 MIR4474-201ENST00000579189 78 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AC010928.2-201ENST00000588017 287 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 SNORD56.5-201ENST00000364281 72 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 MIR532-201ENST00000385025 91 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AL691517.1-201ENST00000440833 1235 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AL627230.5-201ENST00000619807 58 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 AC116618.1-201ENST00000634617 774 ntBASIC1.17□□□□□ -2.22
CHD7Q9P2D1 RNU6-203P-201ENST00000384038 104 ntBASIC1.16□□□□□ -2.22
CHD7Q9P2D1 AC016769.3-201ENST00000396562 315 ntBASIC1.16□□□□□ -2.22
CHD7Q9P2D1 AC009302.1-201ENST00000417147 390 ntBASIC1.16□□□□□ -2.22
CHD7Q9P2D1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.16□□□□□ -2.22
CHD7Q9P2D1 CENPCP1-201ENST00000533085 2578 ntBASIC1.16□□□□□ -2.22
CHD7Q9P2D1 Z75741.2-201ENST00000417272 1167 ntBASIC1.16□□□□□ -2.22
CHD7Q9P2D1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.16□□□□□ -2.22
CHD7Q9P2D1 HAUS1P1-201ENST00000505275 832 ntBASIC1.16□□□□□ -2.22
CHD7Q9P2D1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
CHD7Q9P2D1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.16□□□□□ -2.22
CHD7Q9P2D1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
CHD7Q9P2D1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
CHD7Q9P2D1 DYNLL1P5-201ENST00000467158 270 ntBASIC1.15□□□□□ -2.22
CHD7Q9P2D1 OR9N1P-202ENST00000494289 481 ntBASIC1.15□□□□□ -2.22
CHD7Q9P2D1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.15□□□□□ -2.22
CHD7Q9P2D1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
CHD7Q9P2D1 RNU6-492P-201ENST00000363035 104 ntBASIC1.15□□□□□ -2.23
CHD7Q9P2D1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.15□□□□□ -2.23
CHD7Q9P2D1 AC074117.2-201ENST00000417130 397 ntBASIC1.15□□□□□ -2.23
CHD7Q9P2D1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.15□□□□□ -2.23
CHD7Q9P2D1 AL445687.1-201ENST00000439946 251 ntBASIC1.15□□□□□ -2.23
CHD7Q9P2D1 ARPC3P2-201ENST00000457786 533 ntBASIC1.15□□□□□ -2.23
CHD7Q9P2D1 RNA5SP121-201ENST00000516537 101 ntBASIC1.15□□□□□ -2.23
CHD7Q9P2D1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 MTND5P25-201ENST00000430499 799 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 AC239860.2-201ENST00000525886 270 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 AP000676.4-201ENST00000624659 623 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 VTRNA1-3-201ENST00000365645 89 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 SNORA6-201ENST00000384033 151 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 PSMA2P3-201ENST00000429685 675 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 VN1R108P-201ENST00000431580 830 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 RNA5SP395-201ENST00000516567 118 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 AC007115.1-201ENST00000546853 234 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 AL020996.3-201ENST00000606617 222 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 AC011155.1-201ENST00000316512 456 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 ANAPC10P1-201ENST00000395991 556 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 HMGN2P20-201ENST00000437531 273 ntBASIC1.14□□□□□ -2.23
CHD7Q9P2D1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CHD7Q9P2D1 AC131280.1-202ENST00000624067 4211 ntBASIC1.13□□□□□ -2.23
CHD7Q9P2D1 Y_RNA.274-201ENST00000364714 101 ntBASIC1.13□□□□□ -2.23
CHD7Q9P2D1 Z86062.1-201ENST00000406773 777 ntBASIC1.13□□□□□ -2.23
CHD7Q9P2D1 AL121601.2-201ENST00000438019 707 ntBASIC1.13□□□□□ -2.23
CHD7Q9P2D1 AP000873.1-201ENST00000463987 400 ntBASIC1.13□□□□□ -2.23
CHD7Q9P2D1 AC116447.1-201ENST00000613153 453 ntBASIC1.13□□□□□ -2.23
CHD7Q9P2D1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CHD7Q9P2D1 RNU1-101P-201ENST00000391171 127 ntBASIC1.13□□□□□ -2.23
CHD7Q9P2D1 RNA5SP492-201ENST00000411330 114 ntBASIC1.13□□□□□ -2.23
CHD7Q9P2D1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.13□□□□□ -2.23
CHD7Q9P2D1 DPPA3P1-201ENST00000448050 469 ntBASIC1.13□□□□□ -2.23
CHD7Q9P2D1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.13□□□□□ -2.23
CHD7Q9P2D1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CHD7Q9P2D1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CHD7Q9P2D1 MIR124-3-201ENST00000384866 87 ntBASIC1.12□□□□□ -2.23
CHD7Q9P2D1 BX682237.1-201ENST00000415016 335 ntBASIC1.12□□□□□ -2.23
CHD7Q9P2D1 HMGB1P49-201ENST00000418882 569 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms