Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 HMGB1P29-201ENST00000505659 499 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 KLHL2P1-201ENST00000508691 521 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC110768.1-201ENST00000509222 400 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-352P-201ENST00000516908 107 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AP000907.2-201ENST00000530827 353 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 SRGNP1-201ENST00000603392 451 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 OR10AB1P-201ENST00000609613 938 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL355472.4-201ENST00000610233 626 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AL713922.2-201ENST00000619384 716 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC012150.2-201ENST00000621300 544 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC079684.1-201ENST00000621405 437 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR3688-2-201ENST00000636963 87 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 AC009902.3-201ENST00000606235 2172 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 MTND5P33-201ENST00000571250 1450 ntBASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
NCKIPSDQ9NZQ3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR208A-201ENST00000362287 71 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 SNORA31-201ENST00000362607 130 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RNA5SP387-201ENST00000364226 106 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-282P-201ENST00000365357 103 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 Y_RNA.450-201ENST00000384198 113 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU2-43P-201ENST00000410306 190 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU4-55P-201ENST00000410731 137 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 MTND3P17-201ENST00000416968 344 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC233728.2-201ENST00000425348 757 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC073464.1-201ENST00000429823 534 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC000111.3-201ENST00000433478 193 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AL121601.2-201ENST00000438019 707 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AL049734.2-201ENST00000441066 616 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RPS3AP46-201ENST00000448352 682 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC006480.1-201ENST00000449887 378 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 ANP32BP2-201ENST00000454525 545 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 C1DP4-201ENST00000455429 424 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 snoU13.4-201ENST00000458916 104 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RPL31P13-201ENST00000484151 370 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RPL7P23-201ENST00000493874 747 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC026801.2-201ENST00000515352 425 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-798P-201ENST00000516912 103 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 FAM92A1P1-201ENST00000528023 890 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 FAM60BP-201ENST00000578364 658 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR3682-201ENST00000581338 84 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 DUXAP4-201ENST00000603046 613 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AL391646.1-201ENST00000603860 190 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AL022099.1-201ENST00000604551 712 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-87P-201ENST00000607561 108 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC017083.3-201ENST00000609955 700 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AC112204.3-201ENST00000623822 332 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 AP003400.5-201ENST00000624827 617 ntBASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NCKIPSDQ9NZQ3 CR848007.1-201ENST00000442354 1699 ntBASIC3.71□□□□□ -1.81
NCKIPSDQ9NZQ3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.71□□□□□ -1.81
NCKIPSDQ9NZQ3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU5E-1-201ENST00000362477 120 ntBASIC3.71□□□□□ -1.82
NCKIPSDQ9NZQ3 RNU6-173P-201ENST00000364215 104 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms