Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 uc_338.25-201ENST00000613756 156 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC008250.2-201ENST00000615261 205 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC006133.1-201ENST00000617106 264 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AC099842.1-201ENST00000619919 596 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AF117829.1-206ENST00000621883 3802 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 AL603839.4-201ENST00000624658 1005 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 MIR6733-201ENST00000635723 61 ntBASIC3.03□□□□□ -1.92
NDE1Q9NXR1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NDE1Q9NXR1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.93
NDE1Q9NXR1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 RNU4-91P-201ENST00000364778 135 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 RNU6-1119P-201ENST00000384349 108 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 SNORD3H-201ENST00000384486 214 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 U8.11-201ENST00000384699 133 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 U8.12-201ENST00000384701 133 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 SNORD17-201ENST00000390930 237 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 RPL5P18-201ENST00000406671 891 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 USP9YP14-201ENST00000430663 563 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 OR4K11P-201ENST00000431829 904 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 MTND4LP10-201ENST00000435146 291 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 PDSS1P2-201ENST00000449397 678 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC140076.1-201ENST00000449897 361 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 SSXP1-201ENST00000453640 473 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 snoU109.4-201ENST00000458953 143 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 U8.18-201ENST00000459285 133 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 RPL23AP11-201ENST00000475260 469 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 RN7SL633P-201ENST00000488974 297 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 ARL2BPP4-201ENST00000506854 471 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 ARL4AP2-201ENST00000507378 601 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 PAICSP4-201ENST00000517543 1253 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AP002963.1-201ENST00000530590 184 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 CR383656.7-201ENST00000548164 174 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC010653.1-201ENST00000571108 881 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC060771.1-201ENST00000582031 164 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC006130.2-201ENST00000586202 326 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 BNIP3P8-201ENST00000597863 560 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC107871.2-201ENST00000612894 502 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC100793.4-201ENST00000613683 429 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC098679.4-201ENST00000624241 654 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 RNA5SP196-201ENST00000625967 102 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC099654.13-201ENST00000639774 207 ntBASIC3.02□□□□□ -1.93
NDE1Q9NXR1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NDE1Q9NXR1 AC002546.1-201ENST00000588041 2504 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 MIR181B1-201ENST00000385240 110 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 RNU6-837P-201ENST00000391056 108 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 RNA5SP171-201ENST00000391071 115 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 RPS3AP36-201ENST00000398190 775 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 RPL7P25-201ENST00000404151 721 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 Y_RNA.598-201ENST00000410480 95 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 Y_RNA.608-201ENST00000410647 95 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC079780.1-201ENST00000428259 207 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 RPL17P49-201ENST00000443728 411 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC112653.1-201ENST00000443851 386 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC112204.1-201ENST00000502591 103 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AP003122.4-201ENST00000530980 758 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms