Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 RPS3AP37-201ENST00000419176 745 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC006960.1-201ENST00000419980 153 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 RPS25P9-201ENST00000435591 252 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 MTCO3P45-201ENST00000443036 613 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC016696.1-201ENST00000446949 318 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 RPL21P134-201ENST00000453468 483 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 OR2A20P-203ENST00000498397 1268 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC110760.3-202ENST00000515177 371 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 RNA5SP290-201ENST00000517133 127 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 PSMA2P1-201ENST00000526365 646 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC135507.1-201ENST00000607214 561 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC100793.4-201ENST00000613683 429 ntBASIC2.86□□□□□ -1.95
HPF1Q9NWY4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HPF1Q9NWY4 AC009902.3-201ENST00000606235 2172 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC099786.3-201ENST00000565735 1410 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 RNU6-853P-201ENST00000364306 107 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 SNORA71.1-201ENST00000364523 117 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 Y_RNA.465-201ENST00000384293 102 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 RPL17P50-201ENST00000396131 546 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AL136310.1-201ENST00000404926 654 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 RPL32P35-201ENST00000415214 394 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 USP9YP13-201ENST00000417797 480 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC022018.1-201ENST00000430685 241 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC104389.3-201ENST00000445629 235 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 EEF1E1P1-201ENST00000446998 430 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 TPT1P14-201ENST00000448018 505 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC008481.1-201ENST00000463278 396 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC107626.1-201ENST00000471084 183 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 RPS29P20-201ENST00000489592 171 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 RPS15AP36-201ENST00000492022 382 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC008885.1-201ENST00000514930 301 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 RNU6-390P-201ENST00000516259 103 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 H3F3AP1-201ENST00000559984 334 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC090079.2-201ENST00000575289 768 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AP001269.3-201ENST00000588718 329 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC107075.1-201ENST00000613695 314 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AC092447.7-201ENST00000422212 1621 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 AL137003.2-201ENST00000606924 2538 ntBASIC2.85□□□□□ -1.95
HPF1Q9NWY4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HPF1Q9NWY4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AC023141.4-201ENST00000412031 328 ntBASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 RSL24D1P3-201ENST00000449255 495 ntBASIC2.84□□□□□ -1.95
HPF1Q9NWY4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AC034222.1-201ENST00000494052 532 ntBASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AC098799.1-201ENST00000504752 800 ntBASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AC116353.3-201ENST00000511215 249 ntBASIC2.84□□□□□ -1.95
HPF1Q9NWY4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.84□□□□□ -1.95
HPF1Q9NWY4 RNA5SP217-201ENST00000515959 91 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms