Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-1303P-201ENST00000364841 107 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 U8.8-201ENST00000365399 135 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 SNORA22C-201ENST00000384614 134 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 SNORD73A-201ENST00000386062 65 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AL645927.1-201ENST00000396783 406 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AC017079.2-201ENST00000416102 485 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 RPS23P10-201ENST00000416185 486 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AC140479.3-201ENST00000418944 1126 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AL159987.2-201ENST00000432754 307 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 BX679664.1-201ENST00000434429 253 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AL772161.1-201ENST00000439130 476 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 RN7SL727P-201ENST00000482164 296 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 RPL30P10-201ENST00000488148 337 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AC113155.1-201ENST00000511141 769 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-352P-201ENST00000516908 107 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AC087369.1-201ENST00000520775 996 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 MIR5696-201ENST00000578474 85 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 MIR5692A1-201ENST00000580523 69 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AC108706.1-201ENST00000611053 297 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 TUG1_2.1-201ENST00000614234 87 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.4□□□□□ -1.55
CUEDC1Q9NWM3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CUEDC1Q9NWM3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CUEDC1Q9NWM3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.4□□□□□ -1.55
CUEDC1Q9NWM3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 SAMMSON-226ENST00000642089 1582 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 Y_RNA.383-201ENST00000383855 97 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 SNORA51.8-201ENST00000384234 132 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 RN7SKP125-201ENST00000410481 302 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 CFL1P1-202ENST00000432948 411 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AC007389.2-201ENST00000434630 306 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 PIGFP3-201ENST00000441918 722 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 RNU6-1095P-201ENST00000516148 108 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 MRPS18CP4-201ENST00000535821 231 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 MRPS21P7-201ENST00000566937 238 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 Y_RNA.772-201ENST00000606692 102 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 AC025574.2-201ENST00000615621 514 ntBASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CUEDC1Q9NWM3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 Y_RNA.44-201ENST00000362676 108 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 RNU6-371P-201ENST00000364283 108 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 Y_RNA.233-201ENST00000364407 101 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 Y_RNA.398-201ENST00000383952 99 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 RNU6-1035P-201ENST00000384477 107 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AL033519.2-201ENST00000403958 392 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 RN7SKP51-201ENST00000410781 304 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 TMEM167AP1-201ENST00000423409 219 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AL133173.1-201ENST00000423458 397 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC006946.1-201ENST00000429106 328 ntBASIC5.38□□□□□ -1.55
CUEDC1Q9NWM3 AC087650.1-201ENST00000431445 468 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms