Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 AC091903.1-201ENST00000624322 454 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 SNORA50A-202ENST00000629536 136 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 MTND1P37-201ENST00000636562 264 ntBASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
BLOC1S4Q9NUP1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 SNORA48.8-201ENST00000391324 134 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 RPL7P25-201ENST00000404151 721 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 RNA5SP44-201ENST00000410446 133 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 RNU4-72P-201ENST00000410754 173 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC078974.1-201ENST00000411597 223 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC092447.3-201ENST00000426027 686 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC007919.1-201ENST00000429380 217 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 MED14P1-201ENST00000430517 648 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 TIMM9P1-201ENST00000436122 256 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 RNU7-125P-201ENST00000458760 62 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 MTND4LP3-201ENST00000468320 276 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL135752.1-201ENST00000479477 471 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC068724.1-201ENST00000487100 792 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL160314.1-201ENST00000490836 438 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC098862.1-201ENST00000504991 413 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 SNORA64.4-201ENST00000516632 81 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 RNU6-64P-201ENST00000517119 105 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL133393.1-201ENST00000603277 287 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 NUTF2P8-201ENST00000604593 363 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC069200.1-201ENST00000609511 323 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 uc_338.25-201ENST00000613756 156 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL161629.2-201ENST00000615347 275 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 MIR7112-201ENST00000616126 65 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC009159.1-201ENST00000618386 642 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AC092192.1-201ENST00000633154 1018 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.57□□□□□ -1.84
BLOC1S4Q9NUP1 AL079305.1-201ENST00000623159 3008 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AL445523.1-201ENST00000451184 1362 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 RNU6-198P-201ENST00000384258 104 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 RNU6-809P-201ENST00000384461 107 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 MIR7-3-201ENST00000384898 110 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 RPS20P2-201ENST00000402520 389 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AL359634.1-202ENST00000404721 284 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 RPL7P8-201ENST00000411964 730 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 ELOCP17-201ENST00000414751 326 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 ZNF863P-201ENST00000426746 417 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AC244035.1-201ENST00000430042 390 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AC129850.1-201ENST00000436203 508 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 GDI2P2-201ENST00000445131 608 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AC098826.2-201ENST00000452011 651 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 ELOCP23-201ENST00000452014 332 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 RPF2P2-201ENST00000504693 896 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 MIR3146-201ENST00000580367 79 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AC004696.1-201ENST00000614345 607 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 FRG1KP-201ENST00000623592 341 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AC010149.2-201ENST00000637608 315 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 SRP72P2-201ENST00000344851 1979 ntBASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.56□□□□□ -1.84
BLOC1S4Q9NUP1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.55□□□□□ -1.84
BLOC1S4Q9NUP1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BLOC1S4Q9NUP1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.55□□□□□ -1.84
BLOC1S4Q9NUP1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BLOC1S4Q9NUP1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
BLOC1S4Q9NUP1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
BLOC1S4Q9NUP1 RNU5F-6P-201ENST00000362979 116 ntBASIC3.55□□□□□ -1.84
BLOC1S4Q9NUP1 RNU6-553P-201ENST00000364047 96 ntBASIC3.55□□□□□ -1.84
BLOC1S4Q9NUP1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.55□□□□□ -1.84
BLOC1S4Q9NUP1 RNU6-217P-201ENST00000384164 104 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms