Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4□□□□□ -1.77
VPS45Q9NRW7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4□□□□□ -1.77
VPS45Q9NRW7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS45Q9NRW7 RNU5E-1-201ENST00000362477 120 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 RNU6-1283P-201ENST00000365314 105 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 Y_RNA.372-201ENST00000365599 102 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 DEFB109C-201ENST00000382575 264 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 DEFB109B-201ENST00000382656 264 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4□□□□□ -1.77
VPS45Q9NRW7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4□□□□□ -1.77
VPS45Q9NRW7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4□□□□□ -1.77
VPS45Q9NRW7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4□□□□□ -1.77
VPS45Q9NRW7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4□□□□□ -1.77
VPS45Q9NRW7 AC087650.1-201ENST00000431445 468 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4□□□□□ -1.77
VPS45Q9NRW7 AC119618.1-201ENST00000434191 222 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AC090774.1-201ENST00000435925 246 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AC013267.1-201ENST00000458227 267 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AL121769.1-201ENST00000469473 401 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4□□□□□ -1.77
VPS45Q9NRW7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4□□□□□ -1.77
VPS45Q9NRW7 AC007182.2-201ENST00000489251 402 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
VPS45Q9NRW7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS45Q9NRW7 AC074250.1-201ENST00000511117 192 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AC010342.1-201ENST00000514047 877 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 RNU1-61P-201ENST00000516107 151 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AC107934.1-201ENST00000522215 217 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4□□□□□ -1.77
VPS45Q9NRW7 MED28P6-201ENST00000558776 231 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AC037471.2-201ENST00000564941 598 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 SNORA59B-202ENST00000578183 701 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 OR4K8P-201ENST00000578842 1048 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 MIR4644-201ENST00000579929 84 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 MIR3146-201ENST00000580367 79 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 MIR5195-201ENST00000583555 115 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 BDH2P1-201ENST00000602288 736 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AL391813.2-201ENST00000609113 322 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4□□□□□ -1.77
VPS45Q9NRW7 AL356321.1-201ENST00000621360 228 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 AC005858.4-201ENST00000623191 700 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4□□□□□ -1.77
VPS45Q9NRW7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VPS45Q9NRW7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4□□□□□ -1.77
VPS45Q9NRW7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS45Q9NRW7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
VPS45Q9NRW7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS45Q9NRW7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4□□□□□ -1.77
VPS45Q9NRW7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC066616.2-201ENST00000559334 1481 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 Y_RNA.1-201ENST00000352915 104 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 SNORD6-201ENST00000365444 73 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 Y_RNA.548-201ENST00000384656 105 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 U8.11-201ENST00000384699 133 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 U8.12-201ENST00000384701 133 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 RNU6-114P-201ENST00000384704 105 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 MIR183-201ENST00000384958 110 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 SNORD115-47-201ENST00000391226 86 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 NDUFB4P4-201ENST00000404822 243 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AL590002.1-201ENST00000406554 418 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 RPS3AP24-201ENST00000407896 734 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 SNORA3.3-201ENST00000408712 125 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 RPS29P4-201ENST00000414733 161 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC019097.1-201ENST00000424783 735 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC002486.1-201ENST00000435098 391 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 USP9YP15-201ENST00000442391 422 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 MTND4P18-201ENST00000447010 465 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC132479.1-201ENST00000449160 144 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 MTND1P12-201ENST00000455231 147 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 U8.18-201ENST00000459285 133 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 RPL21P11-201ENST00000461458 483 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 MTCO2P29-201ENST00000465212 189 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC023598.1-201ENST00000472521 361 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 RPS3AP14-201ENST00000483907 780 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC019235.1-201ENST00000503847 207 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 HMGN1P11-201ENST00000508668 303 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 RN7SKP289-201ENST00000517244 295 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC087369.1-201ENST00000520775 996 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC244505.7-201ENST00000599675 272 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC091167.4-201ENST00000605079 184 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 U3.45-201ENST00000607547 219 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC091905.1-201ENST00000624400 311 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 AC244205.2-202ENST00000635781 342 ntBASIC3.99□□□□□ -1.77
VPS45Q9NRW7 LRRC77P-213ENST00000637727 880 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms